Electrona carlsbergi
Electron subantarctic
GC content
47.42%
Whole genome
Non-coding
2,872 bp
D-loop 1,990 bp
Where Electron subantarctic sits among 2,335 species
Whole-genome GC content against maximum lifespan. Electron subantarctic has the 1,966th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome18,282 bp
- GC skew (G − C) / (G + C)
- −0.303
- AT skew (A − T) / (A + T)
- +0.062
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome18,282 bp
Protein-coding11,381 bp
12S rRNA879 bp
16S rRNA1,683 bp
All tRNA1,467 bp
D-loop1,990 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 966 bp | 51.97% | −0.335 | −0.056 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,035 bp | 50.73% | −0.410 | −0.047 | |||||
| COX1Cytochrome c oxidase subunit I | 1,548 bp | 48.26% | −0.264 | −0.044 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 47.61% | −0.301 | +0.028 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 48.21% | −0.506 | +0.172 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.49% | −0.409 | −0.044 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 51.66% | −0.323 | −0.034 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 51.85% | −0.407 | −0.195 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.52% | −0.346 | −0.014 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 50.54% | −0.355 | −0.048 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,824 bp | 47.86% | −0.404 | +0.075 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.58% | −0.432 | +0.504 | |||||
| CYTBCytochrome b | 1,147 bp | 49.26% | −0.342 | −0.055 | |||||
| 12S rRNA12S ribosomal RNA | 879 bp | 51.31% | −0.153 | +0.276 | |||||
| 16S rRNA16S ribosomal RNA | 1,683 bp | 47.00% | −0.123 | +0.240 | |||||
| D-loopControl region (D-loop) | 1,990 bp | 32.97% | −0.311 | +0.051 |
Codon usage
Counts per codon, darker is more frequent3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU87
UUC140
Leu L17.3%
UUA67
UUG18
CUU147
CUC193
CUA169
CUG63
Ile I6.4%
AUU106
AUC138
Met M3.9%
AUA94
AUG53
Val V6.6%
GUU54
GUC83
GUA86
GUG27
Ser S6.4%
UCU40
UCC81
UCA60
UCG5
AGU8
AGC50
Pro P5.9%
CCU38
CCC120
CCA52
CCG14
Thr T7.8%
ACU34
ACC131
ACA113
ACG18
Ala A9.1%
GCU44
GCC191
GCA94
GCG16
Tyr Y2.9%
UAU40
UAC69
His H2.9%
CAU13
CAC98
Gln Q2.5%
CAA76
CAG20
Asn N3.0%
AAU35
AAC79
Lys K2.1%
AAA63
AAG15
Asp D1.9%
GAU18
GAC55
Glu E2.5%
GAA65
GAG29
Cys C0.8%
UGU8
UGC24
Trp W3.2%
UGA97
UGG24
Arg R2.0%
CGU10
CGC13
CGA37
CGG16
Gly G6.6%
GGU22
GGC120
GGA52
GGG57
Stop 0.2%
UAA8
UAG1
AGA0
AGG0
Genome map
39 annotated features in NC_036348.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA23
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 39 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| 12S rRNA | Ribosomal RNA | 1 | 879 | 879 bp | + | 51.3% |
| tRNA-Val | Transfer RNA | 880 | 939 | 60 bp | + | – |
| 16S rRNA | Ribosomal RNA | 952 | 2,634 | 1,683 bp | + | 47.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,635 | 2,695 | 61 bp | + | – |
| ND1 | Protein-coding gene | 2,774 | 3,739 | 966 bp | + | 52.0% |
| tRNA-Ile | Transfer RNA | 3,742 | 3,801 | 60 bp | + | – |
| tRNA-Met | Transfer RNA | 3,830 | 3,889 | 60 bp | + | – |
| tRNA-Trp | Transfer RNA | 3,936 | 3,995 | 60 bp | + | – |
| tRNA-Gln | Transfer RNA | 4,270 | 4,340 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,339 | 4,400 | 62 bp | + | – |
| ND2 | Protein-coding gene | 4,429 | 5,463 | 1,035 bp | + | 50.7% |
| tRNA-Ala | Transfer RNA | 5,501 | 5,569 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,571 | 5,643 | 73 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,705 | 5,776 | 72 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,793 | 5,858 | 66 bp | − | – |
| COX1 | Protein-coding gene | 5,874 | 7,421 | 1,548 bp | + | 48.3% |
| tRNA-Ser (UCN) | Transfer RNA | 7,422 | 7,492 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,496 | 7,555 | 60 bp | + | – |
| COX2 | Protein-coding gene | 7,573 | 8,263 | 691 bp | + | 47.6% |
| tRNA-Lys | Transfer RNA | 8,264 | 8,323 | 60 bp | + | – |
| ATP8 | Protein-coding gene | 8,340 | 8,507 | 168 bp | + | 48.2% |
| ATP6 | Protein-coding gene | 8,498 | 9,181 | 684 bp | + | 46.5% |
| COX3 | Protein-coding gene | 9,201 | 9,984 | 784 bp | + | 51.7% |
| tRNA-Gly | Transfer RNA | 9,985 | 10,045 | 61 bp | + | – |
| ND3 | Protein-coding gene | 10,058 | 10,408 | 351 bp | + | 51.9% |
| tRNA-Arg | Transfer RNA | 10,410 | 10,469 | 60 bp | + | – |
| ND4L | Protein-coding gene | 10,479 | 10,775 | 297 bp | + | 51.5% |
| ND4 | Protein-coding gene | 10,769 | 12,149 | 1,381 bp | + | 50.5% |
| tRNA-His | Transfer RNA | 12,150 | 12,209 | 60 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 12,219 | 12,278 | 60 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 12,302 | 12,361 | 60 bp | + | – |
| ND5 | Protein-coding gene | 12,386 | 14,209 | 1,824 bp | + | 47.9% |
| ND6 | Protein-coding gene | 14,211 | 14,732 | 522 bp | − | 50.6% |
| tRNA-Glu | Transfer RNA | 14,733 | 14,801 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,807 | 15,953 | 1,147 bp | + | 49.3% |
| tRNA-Thr | Transfer RNA | 15,954 | 16,013 | 60 bp | + | – |
| tRNA-Pro | Transfer RNA | 16,075 | 16,148 | 74 bp | − | – |
| D-loop | Control region | 16,149 | 18,138 | 1,990 bp | – | 33.0% |
| tRNA-Phe | Transfer RNA | 18,139 | 18,198 | 60 bp | + | – |