Eleginops maclovinus
Patagonian blennie
GC content
46.23%
Whole genome
Non-coding
1,368 bp
D-loop 1,249 bp
Where Patagonian blennie sits among 2,335 species
Whole-genome GC content against maximum lifespan. Patagonian blennie has the 1,505th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,960 bp
- GC skew (G − C) / (G + C)
- −0.240
- AT skew (A − T) / (A + T)
- −0.010
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,960 bp
Protein-coding11,404 bp
12S rRNA947 bp
16S rRNA1,692 bp
All tRNA1,549 bp
D-loop1,249 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 972 bp | 48.35% | −0.251 | −0.155 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 51.82% | −0.395 | −0.079 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.00% | −0.215 | −0.146 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.86% | −0.226 | −0.066 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 42.26% | −0.239 | −0.072 | |||||
| ATP6ATP synthase F0 subunit 6 | 696 bp | 47.13% | −0.372 | −0.120 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.28% | −0.251 | −0.069 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.28% | −0.345 | −0.228 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.49% | −0.278 | −0.203 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.37% | −0.335 | −0.046 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.93% | −0.298 | −0.070 | |||||
| ND6NADH dehydrogenase subunit 6 | 525 bp | 47.05% | −0.336 | +0.338 | |||||
| CYTBCytochrome b | 1,141 bp | 48.64% | −0.279 | −0.150 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 48.47% | −0.063 | +0.184 | |||||
| 16S rRNA16S ribosomal RNA | 1,692 bp | 45.80% | −0.071 | +0.184 | |||||
| D-loopControl region (D-loop) | 1,249 bp | 32.03% | −0.280 | +0.067 |
Codon usage
Counts per codon, darker is more frequent3,811 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.5%
UUU130
UUC117
Leu L17.0%
UUA82
UUG42
CUU182
CUC149
CUA129
CUG62
Ile I6.9%
AUU138
AUC125
Met M4.1%
AUA76
AUG80
Val V6.2%
GUU62
GUC65
GUA72
GUG37
Ser S6.4%
UCU50
UCC87
UCA39
UCG10
AGU10
AGC49
Pro P5.9%
CCU71
CCC117
CCA28
CCG9
Thr T7.0%
ACU51
ACC119
ACA79
ACG18
Ala A9.9%
GCU74
GCC170
GCA111
GCG24
Tyr Y3.0%
UAU42
UAC71
His H2.7%
CAU35
CAC69
Gln Q2.7%
CAA78
CAG23
Asn N3.0%
AAU41
AAC72
Lys K1.9%
AAA51
AAG23
Asp D2.1%
GAU23
GAC56
Glu E2.5%
GAA65
GAG30
Cys C0.7%
UGU13
UGC14
Trp W3.0%
UGA95
UGG20
Arg R1.9%
CGU12
CGC14
CGA33
CGG14
Gly G6.5%
GGU28
GGC81
GGA74
GGG63
Stop 0.2%
UAA3
UAG3
AGA1
AGG0
Genome map
38 annotated features in NC_033386.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,015 | 947 bp | + | 48.5% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,088 | 2,779 | 1,692 bp | + | 45.8% |
| tRNA-Leu (UUR) | Transfer RNA | 2,780 | 2,853 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,857 | 3,828 | 972 bp | + | 48.4% |
| tRNA-Ile | Transfer RNA | 3,834 | 3,903 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,903 | 3,974 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 3,974 | 4,042 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,043 | 5,088 | 1,046 bp | + | 51.8% |
| tRNA-Trp | Transfer RNA | 5,089 | 5,159 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,161 | 5,229 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,232 | 5,304 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,340 | 5,406 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,407 | 5,477 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,479 | 7,029 | 1,551 bp | + | 47.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,030 | 7,100 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,102 | 7,172 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,180 | 7,870 | 691 bp | + | 44.9% |
| tRNA-Lys | Transfer RNA | 7,871 | 7,944 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,946 | 8,113 | 168 bp | + | 42.3% |
| ATP6 | Protein-coding gene | 8,092 | 8,787 | 696 bp | + | 47.1% |
| COX3 | Protein-coding gene | 8,842 | 9,626 | 785 bp | + | 48.3% |
| tRNA-Gly | Transfer RNA | 9,627 | 9,696 | 70 bp | + | – |
| ND3 | Protein-coding gene | 9,697 | 10,045 | 349 bp | + | 47.3% |
| tRNA-Arg | Transfer RNA | 10,046 | 10,114 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,115 | 10,411 | 297 bp | + | 48.5% |
| ND4 | Protein-coding gene | 10,405 | 11,785 | 1,381 bp | + | 48.4% |
| tRNA-His | Transfer RNA | 11,786 | 11,854 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,855 | 11,921 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,927 | 11,999 | 73 bp | + | – |
| ND5 | Protein-coding gene | 12,000 | 13,838 | 1,839 bp | + | 46.9% |
| ND6 | Protein-coding gene | 13,831 | 14,355 | 525 bp | − | 47.1% |
| tRNA-Glu | Transfer RNA | 14,356 | 14,424 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,429 | 15,569 | 1,141 bp | + | 48.6% |
| tRNA-Thr | Transfer RNA | 15,570 | 15,641 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,642 | 15,711 | 70 bp | − | – |
| D-loop | Control region | 15,712 | 16,960 | 1,249 bp | – | 32.0% |