MitoAge

Eliomys quercinus

Garden dormouse

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Maximum lifespan
5.5 yr
AnAge record
mtDNA size
16,627 bp
RefSeq NC_059783.1
GC content
37.45%
Whole genome
Non-coding
1,237 bp
D-loop 1,155 bp

Where Garden dormouse sits among 2,335 species

Whole-genome GC content against maximum lifespan. Garden dormouse has the 1,964th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Garden dormouse
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,627 bp
GC skew (G − C) / (G + C)
−0.296
AT skew (A − T) / (A + T)
+0.081

Life history

Maximum lifespan
5.5 years
Adult weight
82.5 g
Female sexual maturity
365 days
Male sexual maturity
365 days
Gestation or incubation
23 days
Litter or clutch size
5
Litters per year
1.2
Postnatal growth rate
0.0409 per day

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02981)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,627 bp
Protein-coding11,350 bp
12S rRNA964 bp
16S rRNA1,568 bp
All tRNA1,517 bp
D-loop1,155 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp32.1%29.3%11.7%26.9%38.60%−0.393+0.046
ND2NADH dehydrogenase subunit 21,042 bp34.6%29.6%9.8%26.0%35.80%−0.453+0.079
COX1Cytochrome c oxidase subunit I1,554 bp28.6%30.8%16.8%23.8%40.61%−0.173−0.036
COX2Cytochrome c oxidase subunit II684 bp34.4%28.4%14.3%23.0%37.28%−0.231+0.096
ATP8ATP synthase F0 subunit 8192 bp40.1%29.2%6.8%24.0%30.73%−0.559+0.158
ATP6ATP synthase F0 subunit 6680 bp31.8%30.3%10.7%27.2%37.94%−0.434+0.024
COX3Cytochrome c oxidase subunit III784 bp30.0%29.6%14.7%25.8%40.43%−0.274+0.006
ND3NADH dehydrogenase subunit 3348 bp32.5%31.6%10.3%25.6%35.92%−0.424+0.013
ND4LNADH dehydrogenase subunit 4L297 bp32.0%34.7%12.1%21.2%33.33%−0.273−0.040
ND4NADH dehydrogenase subunit 41,378 bp34.7%28.7%10.2%26.3%36.58%−0.440+0.094
ND5NADH dehydrogenase subunit 51,812 bp32.7%29.7%11.1%26.4%37.53%−0.406+0.048
ND6NADH dehydrogenase subunit 6525 bp43.6%20.8%9.1%26.5%35.62%−0.487+0.355
CYTBCytochrome b1,140 bp30.2%30.4%13.6%25.8%39.39%−0.310−0.004
12S rRNA12S ribosomal RNA964 bp36.4%23.7%18.4%21.6%39.94%−0.081+0.212
16S rRNA16S ribosomal RNA1,568 bp38.0%26.0%17.2%18.8%35.97%−0.043+0.187
D-loopControl region (D-loop)1,155 bp33.5%30.0%10.8%25.6%36.45%−0.406+0.055

Codon usage

Counts per codon, darker is more frequent

3,795 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU109
UUC133
Leu L15.6%
UUA173
UUG18
CUU82
CUC64
CUA222
CUG32
Ile I9.4%
AUU211
AUC144
Met M6.7%
AUA213
AUG40
Val V4.4%
GUU34
GUC26
GUA92
GUG14
Ser S7.8%
UCU58
UCC60
UCA112
UCG7
AGU19
AGC39
Pro P5.1%
CCU42
CCC42
CCA100
CCG9
Thr T8.0%
ACU73
ACC74
ACA140
ACG15
Ala A6.3%
GCU64
GCC82
GCA87
GCG6
Tyr Y3.2%
UAU57
UAC66
His H2.6%
CAU31
CAC68
Gln Q2.1%
CAA80
CAG1
Asn N4.6%
AAU78
AAC95
Lys K2.5%
AAA89
AAG4
Asp D1.9%
GAU30
GAC42
Glu E2.6%
GAA75
GAG25
Cys C0.6%
UGU9
UGC14
Trp W2.7%
UGA91
UGG13
Arg R1.8%
CGU10
CGC10
CGA44
CGG4
Gly G5.7%
GGU33
GGC52
GGA98
GGG32
Stop 0.2%
UAA6
UAG0
AGA1
AGG1

Genome map

38 annotated features in NC_059783.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (37.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,032964 bp+39.9%
tRNA-ValTransfer RNA1,0331,09967 bp+–
16S rRNARibosomal RNA1,1002,6671,568 bp+36.0%
tRNA-Leu (UUR)Transfer RNA2,6682,74275 bp+–
ND1Protein-coding gene2,7453,700956 bp+38.6%
tRNA-IleTransfer RNA3,7013,76969 bp+–
tRNA-GlnTransfer RNA3,7673,84175 bp−–
tRNA-MetTransfer RNA3,8453,91369 bp+–
ND2Protein-coding gene3,9144,9551,042 bp+35.8%
tRNA-TrpTransfer RNA4,9565,02267 bp+–
tRNA-AlaTransfer RNA5,0265,09166 bp−–
tRNA-AsnTransfer RNA5,1025,17473 bp−–
tRNA-CysTransfer RNA5,2115,27767 bp−–
tRNA-TyrTransfer RNA5,2785,34265 bp−–
COX1Protein-coding gene5,3526,9051,554 bp+40.6%
tRNA-Ser (UCN)Transfer RNA6,8976,96670 bp−–
tRNA-AspTransfer RNA6,9707,04576 bp+–
COX2Protein-coding gene7,0467,729684 bp+37.3%
tRNA-LysTransfer RNA7,7337,80068 bp+–
ATP8Protein-coding gene7,8027,993192 bp+30.7%
ATP6Protein-coding gene7,9638,642680 bp+37.9%
COX3Protein-coding gene8,6439,426784 bp+40.4%
tRNA-GlyTransfer RNA9,4279,49670 bp+–
ND3Protein-coding gene9,4979,844348 bp+35.9%
tRNA-ArgTransfer RNA9,8469,91368 bp+–
ND4LProtein-coding gene9,91510,211297 bp+33.3%
ND4Protein-coding gene10,20511,5821,378 bp+36.6%
tRNA-HisTransfer RNA11,58311,65270 bp+–
tRNA-Ser (AGY)Transfer RNA11,65411,71259 bp+–
tRNA-Leu (CUN)Transfer RNA11,71411,78370 bp+–
ND5Protein-coding gene11,78413,5951,812 bp+37.5%
ND6Protein-coding gene13,59214,116525 bp−35.6%
tRNA-GluTransfer RNA14,11714,18670 bp−–
CYTBProtein-coding gene14,19315,3321,140 bp+39.4%
tRNA-ThrTransfer RNA15,33315,40270 bp+–
tRNA-ProTransfer RNA15,40515,47268 bp−–
D-loopControl region15,47316,6271,155 bp–36.5%

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