Embiotoca lateralis
Striped seaperch
GC content
44.00%
Whole genome
Non-coding
895 bp
D-loop 826 bp
Where Striped seaperch sits among 2,335 species
Whole-genome GC content against maximum lifespan. Striped seaperch has the 1,601st longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,536 bp
- GC skew (G − C) / (G + C)
- −0.256
- AT skew (A − T) / (A + T)
- −0.009
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,536 bp
Protein-coding11,452 bp
12S rRNA946 bp
16S rRNA1,693 bp
All tRNA1,550 bp
D-loop826 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 42.46% | −0.290 | −0.148 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 45.51% | −0.454 | −0.074 | |||||
| COX1Cytochrome c oxidase subunit I | 1,596 bp | 44.36% | −0.195 | −0.115 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.84% | −0.243 | −0.063 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 38.69% | −0.569 | −0.010 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 44.59% | −0.430 | −0.098 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.99% | −0.224 | −0.118 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 45.85% | −0.300 | −0.206 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 45.79% | −0.309 | −0.168 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.76% | −0.351 | −0.063 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 42.31% | −0.357 | −0.048 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.44% | −0.440 | +0.400 | |||||
| CYTBCytochrome b | 1,141 bp | 43.91% | −0.297 | −0.144 | |||||
| 12S rRNA12S ribosomal RNA | 946 bp | 47.99% | −0.053 | +0.199 | |||||
| 16S rRNA16S ribosomal RNA | 1,693 bp | 45.01% | −0.087 | +0.222 | |||||
| D-loopControl region (D-loop) | 826 bp | 35.35% | −0.178 | +0.022 |
Codon usage
Counts per codon, darker is more frequent3,822 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.4%
UUU142
UUC102
Leu L17.0%
UUA114
UUG28
CUU191
CUC137
CUA147
CUG34
Ile I7.2%
AUU195
AUC81
Met M4.3%
AUA110
AUG54
Val V5.6%
GUU75
GUC47
GUA68
GUG24
Ser S6.7%
UCU54
UCC77
UCA56
UCG12
AGU20
AGC36
Pro P5.7%
CCU80
CCC92
CCA39
CCG8
Thr T7.9%
ACU65
ACC128
ACA90
ACG19
Ala A9.1%
GCU97
GCC127
GCA107
GCG16
Tyr Y2.9%
UAU45
UAC66
His H2.7%
CAU47
CAC56
Gln Q2.7%
CAA89
CAG13
Asn N2.9%
AAU62
AAC49
Lys K1.9%
AAA66
AAG8
Asp D2.0%
GAU25
GAC53
Glu E2.6%
GAA81
GAG20
Cys C0.6%
UGU5
UGC18
Trp W3.2%
UGA98
UGG23
Arg R2.0%
CGU13
CGC14
CGA39
CGG9
Gly G6.4%
GGU43
GGC90
GGA67
GGG44
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_066926.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,015 | 946 bp | + | 48.0% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,088 | 2,780 | 1,693 bp | + | 45.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,781 | 2,854 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,829 | 975 bp | + | 42.5% |
| tRNA-Ile | Transfer RNA | 3,835 | 3,903 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,903 | 3,973 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,973 | 4,041 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,042 | 5,087 | 1,046 bp | + | 45.5% |
| tRNA-Trp | Transfer RNA | 5,088 | 5,160 | 73 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,162 | 5,230 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,233 | 5,305 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,339 | 5,404 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,406 | 5,472 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,474 | 7,069 | 1,596 bp | + | 44.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,070 | 7,140 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,144 | 7,215 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,225 | 7,915 | 691 bp | + | 42.8% |
| tRNA-Lys | Transfer RNA | 7,916 | 7,989 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,991 | 8,158 | 168 bp | + | 38.7% |
| ATP6 | Protein-coding gene | 8,149 | 8,832 | 684 bp | + | 44.6% |
| COX3 | Protein-coding gene | 8,832 | 9,616 | 785 bp | + | 46.0% |
| tRNA-Gly | Transfer RNA | 9,617 | 9,686 | 70 bp | + | – |
| ND3 | Protein-coding gene | 9,687 | 10,035 | 349 bp | + | 45.9% |
| tRNA-Arg | Transfer RNA | 10,036 | 10,104 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,105 | 10,401 | 297 bp | + | 45.8% |
| ND4 | Protein-coding gene | 10,395 | 11,775 | 1,381 bp | + | 45.8% |
| tRNA-His | Transfer RNA | 11,776 | 11,844 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,845 | 11,912 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,919 | 11,991 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,992 | 13,830 | 1,839 bp | + | 42.3% |
| ND6 | Protein-coding gene | 13,827 | 14,348 | 522 bp | − | 44.4% |
| tRNA-Glu | Transfer RNA | 14,349 | 14,418 | 70 bp | − | – |
| CYTB | Protein-coding gene | 14,423 | 15,563 | 1,141 bp | + | 43.9% |
| tRNA-Thr | Transfer RNA | 15,564 | 15,638 | 75 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,638 | 15,707 | 70 bp | − | – |
| D-loop | Control region | 15,711 | 16,536 | 826 bp | – | 35.4% |