Engraulis encrasicolus

European anchovy

Maximum lifespan

3 yr

AnAge record

mtDNA size

16,674 bp

RefSeq NC_009581.1

GC content

45.89%

Whole genome

Non-coding

1,098 bp

D-loop 1,024 bp

Where European anchovy sits among 2,335 species

Whole-genome GC content against maximum lifespan. European anchovy has the 2,177th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,674 bp

GC skew (G − C) / (G + C): −0.198
AT skew (A − T) / (A + T): +0.009

Life history

Maximum lifespan: 3 years
Female sexual maturity: 365 days
Male sexual maturity: 365 days

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03855)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,674 bp

Protein-coding11,395 bp

12S rRNA950 bp

16S rRNA1,683 bp

All tRNA1,548 bp

D-loop1,024 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Engraulis encrasicolus genes

ND1NADH dehydrogenase subunit 1	973 bp	23.8%	28.2%	18.1%	29.9%	48.00%	−0.246	−0.083
ND2NADH dehydrogenase subunit 2	1,045 bp	25.1%	27.0%	16.2%	31.8%	47.94%	−0.325	−0.037
COX1Cytochrome c oxidase subunit I	1,545 bp	25.9%	30.0%	18.8%	25.3%	44.08%	−0.148	−0.074
COX2Cytochrome c oxidase subunit II	691 bp	28.2%	28.2%	18.2%	25.3%	43.56%	−0.163	0.000
ATP8ATP synthase F0 subunit 8	168 bp	30.4%	30.4%	11.9%	27.4%	39.29%	−0.394	0.000
ATP6ATP synthase F0 subunit 6	683 bp	24.9%	31.5%	15.2%	28.4%	43.63%	−0.302	−0.117
COX3Cytochrome c oxidase subunit III	785 bp	24.1%	28.8%	19.2%	27.9%	47.13%	−0.184	−0.089
ND3NADH dehydrogenase subunit 3	349 bp	21.5%	29.8%	19.8%	28.9%	48.71%	−0.188	−0.162
ND4LNADH dehydrogenase subunit 4L	297 bp	24.6%	29.0%	19.2%	27.3%	46.47%	−0.174	−0.082
ND4NADH dehydrogenase subunit 4	1,381 bp	25.1%	27.4%	17.3%	30.2%	47.50%	−0.271	−0.046
ND5NADH dehydrogenase subunit 5	1,836 bp	26.5%	28.0%	16.9%	28.5%	45.48%	−0.255	−0.027
ND6NADH dehydrogenase subunit 6	522 bp	33.7%	16.3%	18.0%	32.0%	50.00%	−0.280	+0.349
CYTBCytochrome b	1,141 bp	25.1%	30.3%	16.8%	27.8%	44.61%	−0.246	−0.095
12S rRNA12S ribosomal RNA	950 bp	30.1%	20.5%	22.3%	27.1%	49.37%	−0.096	+0.189
16S rRNA16S ribosomal RNA	1,683 bp	33.3%	20.9%	21.3%	24.6%	45.87%	−0.073	+0.229
D-loopControl region (D-loop)	1,024 bp	29.1%	31.1%	16.3%	23.5%	39.84%	−0.181	−0.032

Codon usage

Counts per codon, darker is more frequent

Gene

3,802 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%

UUU93

UUC140

Leu L16.0%

UUA95

UUG37

CUU164

CUC96

CUA145

CUG70

Ile I7.3%

AUU165

AUC112

Met M4.2%

AUA51

AUG108

Val V6.4%

GUU62

GUC48

GUA97

GUG38

Ser S6.0%

UCU56

UCC49

UCA55

UCG16

AGU13

AGC38

Pro P5.7%

CCU84

CCC61

CCA51

CCG19

Thr T8.5%

ACU85

ACC114

ACA103

ACG20

Ala A9.6%

GCU87

GCC109

GCA128

GCG41

Tyr Y2.9%

UAU33

UAC76

His H2.8%

CAU22

CAC83

Gln Q2.6%

CAA75

CAG25

Asn N3.0%

AAU39

AAC76

Lys K2.0%

AAA49

AAG27

Asp D1.9%

GAU23

GAC51

Glu E2.7%

GAA69

GAG34

Cys C0.8%

UGU10

UGC20

Trp W3.1%

UGA100

UGG19

Arg R1.9%

CGU8

CGC9

CGA39

CGG17

Gly G6.4%

GGU35

GGC54

GGA101

GGG53

Stop 0.1%

UAA4

UAG1

AGA0

AGG0

Genome map

38 annotated features in NC_009581.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Engraulis encrasicolus (NC_009581.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,019	950 bp	+	49.4%
tRNA-Val	Transfer RNA	1,020	1,091	72 bp	+	–
16S rRNA	Ribosomal RNA	1,092	2,774	1,683 bp	+	45.9%
tRNA-Leu (UUR)	Transfer RNA	2,788	2,862	75 bp	+	–
ND1	Protein-coding gene	2,864	3,836	973 bp	+	48.0%
tRNA-Ile	Transfer RNA	3,837	3,908	72 bp	+	–
tRNA-Gln	Transfer RNA	3,911	3,981	71 bp	−	–
tRNA-Met	Transfer RNA	3,981	4,049	69 bp	+	–
ND2	Protein-coding gene	4,050	5,094	1,045 bp	+	47.9%
tRNA-Trp	Transfer RNA	5,096	5,165	70 bp	+	–
tRNA-Ala	Transfer RNA	5,168	5,236	69 bp	−	–
tRNA-Asn	Transfer RNA	5,238	5,310	73 bp	−	–
tRNA-Cys	Transfer RNA	5,342	5,407	66 bp	−	–
tRNA-Tyr	Transfer RNA	5,408	5,478	71 bp	−	–
COX1	Protein-coding gene	5,480	7,024	1,545 bp	+	44.1%
tRNA-Ser (UCN)	Transfer RNA	7,025	7,095	71 bp	−	–
tRNA-Asp	Transfer RNA	7,101	7,168	68 bp	+	–
COX2	Protein-coding gene	7,179	7,869	691 bp	+	43.6%
tRNA-Lys	Transfer RNA	7,870	7,942	73 bp	+	–
ATP8	Protein-coding gene	7,944	8,111	168 bp	+	39.3%
ATP6	Protein-coding gene	8,102	8,784	683 bp	+	43.6%
COX3	Protein-coding gene	8,785	9,569	785 bp	+	47.1%
tRNA-Gly	Transfer RNA	9,570	9,640	71 bp	+	–
ND3	Protein-coding gene	9,641	9,989	349 bp	+	48.7%
tRNA-Arg	Transfer RNA	9,990	10,058	69 bp	+	–
ND4L	Protein-coding gene	10,059	10,355	297 bp	+	46.5%
ND4	Protein-coding gene	10,349	11,729	1,381 bp	+	47.5%
tRNA-His	Transfer RNA	11,730	11,798	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,800	11,866	67 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,867	11,938	72 bp	+	–
ND5	Protein-coding gene	11,939	13,774	1,836 bp	+	45.5%
ND6	Protein-coding gene	13,771	14,292	522 bp	−	50.0%
tRNA-Glu	Transfer RNA	14,293	14,361	69 bp	−	–
CYTB	Protein-coding gene	14,367	15,507	1,141 bp	+	44.6%
tRNA-Thr	Transfer RNA	15,508	15,580	73 bp	+	–
tRNA-Pro	Transfer RNA	15,580	15,650	71 bp	−	–
D-loop	Control region	15,651	16,674	1,024 bp	–	39.8%