Epinephelus polyphekadion
Camouflage grouper
GC content
43.26%
Whole genome
Non-coding
1,006 bp
Including the D-loop
Where Camouflage grouper sits among 2,335 species
Whole-genome GC content against maximum lifespan. Camouflage grouper has the 424th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,619 bp
- GC skew (G − C) / (G + C)
- −0.274
- AT skew (A − T) / (A + T)
- +0.021
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,619 bp
Protein-coding11,406 bp
12S rRNA952 bp
16S rRNA1,693 bp
All tRNA1,562 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 43.90% | −0.350 | −0.090 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 44.40% | −0.491 | +0.071 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.13% | −0.199 | −0.107 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 41.82% | −0.260 | +0.015 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 41.67% | −0.400 | −0.020 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 40.21% | −0.382 | −0.061 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.86% | −0.294 | −0.064 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.41% | −0.316 | −0.196 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.14% | −0.429 | −0.083 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 43.88% | −0.383 | −0.027 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 43.01% | −0.381 | −0.006 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 43.10% | −0.404 | +0.401 | |||||
| CYTBCytochrome b | 1,141 bp | 43.21% | −0.343 | −0.123 | |||||
| 12S rRNA12S ribosomal RNA | 952 bp | 48.11% | −0.100 | +0.170 | |||||
| 16S rRNA16S ribosomal RNA | 1,693 bp | 45.72% | −0.111 | +0.234 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU118
UUC123
Leu L17.4%
UUA111
UUG22
CUU170
CUC121
CUA205
CUG34
Ile I7.3%
AUU169
AUC110
Met M4.1%
AUA124
AUG33
Val V5.8%
GUU75
GUC46
GUA78
GUG20
Ser S6.5%
UCU44
UCC78
UCA63
UCG6
AGU17
AGC40
Pro P5.7%
CCU77
CCC84
CCA47
CCG9
Thr T8.0%
ACU68
ACC99
ACA130
ACG8
Ala A8.7%
GCU83
GCC119
GCA121
GCG8
Tyr Y2.9%
UAU46
UAC63
His H2.8%
CAU32
CAC76
Gln Q2.5%
CAA89
CAG7
Asn N3.0%
AAU33
AAC80
Lys K2.0%
AAA69
AAG8
Asp D2.0%
GAU31
GAC46
Glu E2.5%
GAA76
GAG21
Cys C0.7%
UGU11
UGC17
Trp W3.1%
UGA103
UGG16
Arg R2.0%
CGU17
CGC12
CGA45
CGG4
Gly G6.3%
GGU61
GGC68
GGA78
GGG31
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_072956.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,022 | 952 bp | + | 48.1% |
| tRNA-Val | Transfer RNA | 1,024 | 1,093 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,109 | 2,801 | 1,693 bp | + | 45.7% |
| tRNA-Leu (UUR) | Transfer RNA | 2,802 | 2,877 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,878 | 3,852 | 975 bp | + | 43.9% |
| tRNA-Ile | Transfer RNA | 3,857 | 3,927 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,927 | 3,997 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,998 | 4,067 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,068 | 5,112 | 1,045 bp | + | 44.4% |
| tRNA-Trp | Transfer RNA | 5,113 | 5,183 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,185 | 5,253 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,254 | 5,326 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,365 | 5,432 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,433 | 5,503 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,505 | 7,055 | 1,551 bp | + | 43.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,058 | 7,128 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,132 | 7,203 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,212 | 7,902 | 691 bp | + | 41.8% |
| tRNA-Lys | Transfer RNA | 7,903 | 7,976 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,978 | 8,145 | 168 bp | + | 41.7% |
| ATP6 | Protein-coding gene | 8,136 | 8,819 | 684 bp | + | 40.2% |
| COX3 | Protein-coding gene | 8,819 | 9,603 | 785 bp | + | 45.9% |
| tRNA-Gly | Transfer RNA | 9,604 | 9,675 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,676 | 10,024 | 349 bp | + | 44.4% |
| tRNA-Arg | Transfer RNA | 10,025 | 10,093 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,094 | 10,390 | 297 bp | + | 47.1% |
| ND4 | Protein-coding gene | 10,384 | 11,764 | 1,381 bp | + | 43.9% |
| tRNA-His | Transfer RNA | 11,765 | 11,834 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,836 | 11,904 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,914 | 11,986 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,987 | 13,825 | 1,839 bp | + | 43.0% |
| ND6 | Protein-coding gene | 13,822 | 14,343 | 522 bp | − | 43.1% |
| tRNA-Glu | Transfer RNA | 14,344 | 14,412 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,420 | 15,560 | 1,141 bp | + | 43.2% |
| tRNA-Thr | Transfer RNA | 15,561 | 15,634 | 74 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,635 | 15,704 | 70 bp | − | – |