MitoAge

Equus zebra

Mountain zebra

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Maximum lifespan
33.2 yr
AnAge record
mtDNA size
16,405 bp
RefSeq NC_020476.1
GC content
41.80%
Whole genome
Non-coding
1,015 bp
D-loop 935 bp

Where Mountain zebra sits among 2,335 species

Whole-genome GC content against maximum lifespan. Mountain zebra has the 361st longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Mountain zebra
  • This species
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  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,405 bp
GC skew (G − C) / (G + C)
−0.362
AT skew (A − T) / (A + T)
+0.108

Life history

Maximum lifespan
33.2 years
Adult weight
296 kg
Birth weight
35 kg
Female sexual maturity
2.8 years
Male sexual maturity
3.5 years
Gestation or incubation
362 days
Litter or clutch size
1
Litters per year
0.6

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02642)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,405 bp
Protein-coding11,331 bp
12S rRNA971 bp
16S rRNA1,578 bp
All tRNA1,513 bp
D-loop935 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.1%26.7%11.4%30.9%42.26%−0.460+0.076
ND2NADH dehydrogenase subunit 21,039 bp35.0%24.8%9.0%31.2%40.14%−0.554+0.170
COX1Cytochrome c oxidase subunit I1,545 bp27.6%28.8%16.2%27.4%43.63%−0.255−0.022
COX2Cytochrome c oxidase subunit II684 bp32.5%25.0%13.7%28.8%42.54%−0.354+0.130
ATP8ATP synthase F0 subunit 8204 bp38.7%26.5%8.8%26.0%34.80%−0.493+0.188
ATP6ATP synthase F0 subunit 6681 bp31.1%27.6%11.3%30.0%41.26%−0.452+0.060
COX3Cytochrome c oxidase subunit III784 bp27.4%26.9%14.9%30.7%45.66%−0.346+0.009
ND3NADH dehydrogenase subunit 3348 bp30.7%25.9%12.9%30.5%43.39%−0.404+0.086
ND4LNADH dehydrogenase subunit 4L297 bp29.6%28.6%12.5%29.3%41.75%−0.403+0.017
ND4NADH dehydrogenase subunit 41,378 bp32.4%26.1%10.6%31.0%41.58%−0.490+0.108
ND5NADH dehydrogenase subunit 51,815 bp30.6%25.9%11.3%32.2%43.53%−0.478+0.083
ND6NADH dehydrogenase subunit 6528 bp41.1%19.5%7.8%31.6%39.39%−0.606+0.356
CYTBCytochrome b1,140 bp27.9%26.5%13.2%32.5%45.61%−0.423+0.026
12S rRNA12S ribosomal RNA971 bp36.4%21.2%18.1%24.3%42.43%−0.146+0.263
16S rRNA16S ribosomal RNA1,578 bp36.9%24.5%16.3%22.3%38.59%−0.156+0.203
D-loopControl region (D-loop)935 bp30.2%27.1%13.8%27.4%41.85%−0.330+0.054

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU80
UUC157
Leu L16.2%
UUA69
UUG15
CUU65
CUC139
CUA278
CUG49
Ile I9.0%
AUU134
AUC206
Met M6.0%
AUA187
AUG39
Val V4.7%
GUU37
GUC53
GUA64
GUG25
Ser S8.0%
UCU41
UCC71
UCA111
UCG16
AGU15
AGC48
Pro P5.1%
CCU41
CCC69
CCA76
CCG6
Thr T8.3%
ACU58
ACC105
ACA139
ACG14
Ala A6.4%
GCU40
GCC113
GCA85
GCG4
Tyr Y3.4%
UAU46
UAC83
His H2.7%
CAU25
CAC78
Gln Q2.4%
CAA81
CAG10
Asn N4.0%
AAU38
AAC114
Lys K2.6%
AAA86
AAG11
Asp D1.7%
GAU16
GAC49
Glu E2.6%
GAA85
GAG13
Cys C0.6%
UGU3
UGC20
Trp W2.7%
UGA95
UGG9
Arg R1.7%
CGU7
CGC17
CGA36
CGG4
Gly G5.6%
GGU34
GGC60
GGA92
GGG28
Stop 0.2%
UAA8
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_020476.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (41.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17171 bp+–
12S rRNARibosomal RNA721,042971 bp+42.4%
tRNA-ValTransfer RNA1,0431,10967 bp+–
16S rRNARibosomal RNA1,1102,6871,578 bp+38.6%
tRNA-Leu (UUR)Transfer RNA2,6882,76275 bp+–
ND1Protein-coding gene2,7653,720956 bp+42.3%
tRNA-IleTransfer RNA3,7213,78969 bp+–
tRNA-GlnTransfer RNA3,7873,85973 bp−–
tRNA-MetTransfer RNA3,8623,93069 bp+–
ND2Protein-coding gene3,9314,9691,039 bp+40.1%
tRNA-TrpTransfer RNA4,9705,03869 bp+–
tRNA-AlaTransfer RNA5,0445,11269 bp−–
tRNA-AsnTransfer RNA5,1145,18673 bp−–
tRNA-CysTransfer RNA5,2195,28466 bp−–
tRNA-TyrTransfer RNA5,2855,35167 bp−–
COX1Protein-coding gene5,3536,8971,545 bp+43.6%
tRNA-Ser (UCN)Transfer RNA6,8956,96369 bp−–
tRNA-AspTransfer RNA6,9727,03867 bp+–
COX2Protein-coding gene7,0397,722684 bp+42.5%
tRNA-LysTransfer RNA7,7267,79368 bp+–
ATP8Protein-coding gene7,7957,998204 bp+34.8%
ATP6Protein-coding gene7,9568,636681 bp+41.3%
COX3Protein-coding gene8,6369,419784 bp+45.7%
tRNA-GlyTransfer RNA9,4209,48869 bp+–
ND3Protein-coding gene9,4899,836348 bp+43.4%
tRNA-ArgTransfer RNA9,8379,90569 bp+–
ND4LProtein-coding gene9,90710,203297 bp+41.8%
ND4Protein-coding gene10,19711,5741,378 bp+41.6%
tRNA-HisTransfer RNA11,57511,64369 bp+–
tRNA-Ser (AGY)Transfer RNA11,64411,70360 bp+–
tRNA-Leu (CUN)Transfer RNA11,70511,77470 bp+–
ND5Protein-coding gene11,78113,5951,815 bp+43.5%
ND6Protein-coding gene13,57914,106528 bp−39.4%
tRNA-GluTransfer RNA14,10714,17569 bp−–
CYTBProtein-coding gene14,18015,3191,140 bp+45.6%
tRNA-ThrTransfer RNA15,32015,39172 bp+–
tRNA-ProTransfer RNA15,39315,45866 bp−–
D-loopControl region15,45916,393935 bp–41.9%

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