MitoAge

Erinaceus concolor

Eastern European hedgehog

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Maximum lifespan
7 yr
AnAge record
mtDNA size
17,451 bp
RefSeq NC_087902.1
GC content
32.66%
Whole genome
Non-coding
2,043 bp
D-loop 1,977 bp

Where Eastern European hedgehog sits among 2,335 species

Whole-genome GC content against maximum lifespan. Eastern European hedgehog has the 1,825th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Eastern European hedgehog
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,451 bp
GC skew (G − C) / (G + C)
−0.239
AT skew (A − T) / (A + T)
+0.010

Life history

Maximum lifespan
7 years
Adult weight
719 g
Birth weight
22 g
Basal metabolic rate
1.937 W
Body temperature
35.2 °C
Female sexual maturity
213 days
Male sexual maturity
253 days
Gestation or incubation
35 days
Litter or clutch size
4.5
Litters per year
1.5

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02584)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, tiny sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,451 bp
Protein-coding11,350 bp
12S rRNA969 bp
16S rRNA1,581 bp
All tRNA1,511 bp
D-loop1,977 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1954 bp31.8%34.9%11.1%22.2%33.33%−0.333−0.047
ND2NADH dehydrogenase subunit 21,045 bp36.2%35.5%8.3%20.0%28.33%−0.412+0.009
COX1Cytochrome c oxidase subunit I1,545 bp27.7%35.7%15.9%20.8%36.63%−0.134−0.126
COX2Cytochrome c oxidase subunit II684 bp31.4%34.5%13.0%21.1%34.06%−0.236−0.047
ATP8ATP synthase F0 subunit 8207 bp38.6%33.8%6.8%20.8%27.54%−0.509+0.067
ATP6ATP synthase F0 subunit 6681 bp33.6%34.4%9.0%23.1%32.01%−0.440−0.011
COX3Cytochrome c oxidase subunit III784 bp28.3%36.2%14.0%21.4%35.46%−0.209−0.123
ND3NADH dehydrogenase subunit 3347 bp34.3%34.9%10.7%20.2%30.84%−0.308−0.008
ND4LNADH dehydrogenase subunit 4L297 bp32.0%37.7%12.1%18.2%30.30%−0.200−0.082
ND4NADH dehydrogenase subunit 41,378 bp33.8%36.4%9.6%20.2%29.75%−0.356−0.037
ND5NADH dehydrogenase subunit 51,812 bp33.9%35.8%10.1%20.2%30.30%−0.333−0.026
ND6NADH dehydrogenase subunit 6534 bp43.4%25.5%7.7%23.4%31.09%−0.506+0.261
CYTBCytochrome b1,140 bp29.3%36.5%12.0%22.2%34.21%−0.297−0.109
12S rRNA12S ribosomal RNA969 bp36.4%26.8%18.0%18.8%36.74%−0.022+0.152
16S rRNA16S ribosomal RNA1,581 bp37.5%27.9%16.7%17.9%34.60%−0.035+0.147
D-loopControl region (D-loop)1,977 bp37.1%32.4%11.4%19.1%30.45%−0.252+0.068

Codon usage

Counts per codon, darker is more frequent

3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.5%
UUU176
UUC72
Leu L15.2%
UUA245
UUG13
CUU101
CUC39
CUA159
CUG20
Ile I10.1%
AUU301
AUC84
Met M7.3%
AUA248
AUG28
Val V4.2%
GUU49
GUC18
GUA80
GUG11
Ser S8.0%
UCU81
UCC39
UCA120
UCG5
AGU26
AGC33
Pro P4.7%
CCU83
CCC45
CCA45
CCG7
Thr T7.0%
ACU85
ACC42
ACA130
ACG9
Ala A6.1%
GCU92
GCC61
GCA77
GCG1
Tyr Y3.8%
UAU92
UAC53
His H2.7%
CAU73
CAC30
Gln Q2.0%
CAA70
CAG7
Asn N4.6%
AAU128
AAC48
Lys K2.7%
AAA98
AAG6
Asp D1.9%
GAU47
GAC24
Glu E2.5%
GAA87
GAG9
Cys C0.8%
UGU18
UGC13
Trp W2.7%
UGA93
UGG8
Arg R1.6%
CGU17
CGC10
CGA33
CGG2
Gly G5.3%
GGU57
GGC42
GGA79
GGG23
Stop 0.2%
UAA7
UAG1
AGA1
AGG0

Genome map

38 annotated features in NC_087902.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (32.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16666 bp+–
12S rRNARibosomal RNA671,035969 bp+36.7%
tRNA-ValTransfer RNA1,0361,10267 bp+–
16S rRNARibosomal RNA1,1032,6831,581 bp+34.6%
tRNA-Leu (UUR)Transfer RNA2,6842,75875 bp+–
ND1Protein-coding gene2,7603,713954 bp+33.3%
tRNA-IleTransfer RNA3,7143,78269 bp+–
tRNA-GlnTransfer RNA3,7803,85273 bp−–
tRNA-MetTransfer RNA3,8523,91968 bp+–
ND2Protein-coding gene3,9234,9671,045 bp+28.3%
tRNA-TrpTransfer RNA4,9685,03568 bp+–
tRNA-AlaTransfer RNA5,0405,10970 bp−–
tRNA-AsnTransfer RNA5,1115,18373 bp−–
tRNA-CysTransfer RNA5,2205,28869 bp−–
tRNA-TyrTransfer RNA5,2905,35970 bp−–
COX1Protein-coding gene5,3616,9051,545 bp+36.6%
tRNA-Ser (UCN)Transfer RNA6,9036,97169 bp−–
tRNA-AspTransfer RNA6,9797,04870 bp+–
COX2Protein-coding gene7,0507,733684 bp+34.1%
tRNA-LysTransfer RNA7,7357,79965 bp+–
ATP8Protein-coding gene7,8028,008207 bp+27.5%
ATP6Protein-coding gene7,9638,643681 bp+32.0%
COX3Protein-coding gene8,6439,426784 bp+35.5%
tRNA-GlyTransfer RNA9,4279,50074 bp+–
ND3Protein-coding gene9,5019,847347 bp+30.8%
tRNA-ArgTransfer RNA9,8489,91669 bp+–
ND4LProtein-coding gene9,91710,213297 bp+30.3%
ND4Protein-coding gene10,20711,5841,378 bp+29.8%
tRNA-HisTransfer RNA11,58511,65066 bp+–
tRNA-Ser (AGY)Transfer RNA11,65111,71060 bp+–
tRNA-Leu (CUN)Transfer RNA11,71011,78071 bp+–
ND5Protein-coding gene11,78513,5961,812 bp+30.3%
ND6Protein-coding gene13,59314,126534 bp−31.1%
tRNA-GluTransfer RNA14,12714,19468 bp−–
CYTBProtein-coding gene14,19815,3371,140 bp+34.2%
tRNA-ThrTransfer RNA15,33815,40770 bp+–
tRNA-ProTransfer RNA15,40915,47466 bp−–
D-loopControl region15,47517,4511,977 bp–30.5%

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