Etelis coruscans
Deepwater longtail red snapper
GC content
46.96%
Whole genome
Non-coding
889 bp
Including the D-loop
Where Deepwater longtail red snapper sits among 2,335 species
Whole-genome GC content against maximum lifespan. Deepwater longtail red snapper has the 948th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,494 bp
- GC skew (G − C) / (G + C)
- −0.269
- AT skew (A − T) / (A + T)
- +0.045
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,494 bp
Protein-coding11,408 bp
12S rRNA947 bp
16S rRNA1,696 bp
All tRNA1,554 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 49.03% | −0.364 | −0.034 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.57% | −0.418 | +0.048 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.07% | −0.170 | −0.099 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.28% | −0.275 | +0.018 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 45.24% | −0.474 | +0.109 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 45.68% | −0.449 | −0.030 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 47.13% | −0.314 | −0.036 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 49.57% | −0.329 | −0.182 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.400 | −0.102 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.15% | −0.326 | −0.022 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.87% | −0.371 | +0.032 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.70% | −0.365 | +0.465 | |||||
| CYTBCytochrome b | 1,142 bp | 47.46% | −0.325 | −0.053 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 47.31% | −0.089 | +0.186 | |||||
| 16S rRNA16S ribosomal RNA | 1,696 bp | 47.47% | −0.121 | +0.237 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU92
UUC143
Leu L17.5%
UUA81
UUG23
CUU156
CUC157
CUA184
CUG66
Ile I6.8%
AUU138
AUC119
Met M4.0%
AUA65
AUG87
Val V6.1%
GUU61
GUC71
GUA78
GUG21
Ser S6.3%
UCU37
UCC69
UCA68
UCG10
AGU8
AGC48
Pro P5.8%
CCU59
CCC98
CCA57
CCG7
Thr T7.9%
ACU43
ACC133
ACA110
ACG16
Ala A9.1%
GCU63
GCC155
GCA109
GCG21
Tyr Y2.9%
UAU31
UAC81
His H2.7%
CAU24
CAC80
Gln Q2.7%
CAA85
CAG17
Asn N3.2%
AAU29
AAC92
Lys K2.0%
AAA67
AAG8
Asp D1.9%
GAU10
GAC62
Glu E2.7%
GAA71
GAG32
Cys C0.6%
UGU6
UGC17
Trp W3.2%
UGA100
UGG20
Arg R2.0%
CGU7
CGC8
CGA48
CGG12
Gly G6.3%
GGU33
GGC85
GGA66
GGG56
Stop 0.2%
UAA6
UAG0
AGA0
AGG0
Genome map
37 annotated features in NC_086877.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,015 | 947 bp | + | 47.3% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,088 | 2,783 | 1,696 bp | + | 47.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,784 | 2,857 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,858 | 3,832 | 975 bp | + | 49.0% |
| tRNA-Ile | Transfer RNA | 3,836 | 3,905 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,905 | 3,975 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,975 | 4,043 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,044 | 5,089 | 1,046 bp | + | 50.6% |
| tRNA-Trp | Transfer RNA | 5,090 | 5,162 | 73 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,163 | 5,231 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,233 | 5,305 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,343 | 5,409 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,410 | 5,480 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,482 | 7,032 | 1,551 bp | + | 47.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,034 | 7,104 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,108 | 7,179 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,188 | 7,878 | 691 bp | + | 44.3% |
| tRNA-Lys | Transfer RNA | 7,879 | 7,953 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,955 | 8,122 | 168 bp | + | 45.2% |
| ATP6 | Protein-coding gene | 8,113 | 8,795 | 683 bp | + | 45.7% |
| COX3 | Protein-coding gene | 8,796 | 9,580 | 785 bp | + | 47.1% |
| tRNA-Gly | Transfer RNA | 9,581 | 9,652 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,653 | 10,001 | 349 bp | + | 49.6% |
| tRNA-Arg | Transfer RNA | 10,002 | 10,070 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,071 | 10,367 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,361 | 11,741 | 1,381 bp | + | 48.2% |
| tRNA-His | Transfer RNA | 11,742 | 11,810 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,811 | 11,878 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,883 | 11,955 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,956 | 13,794 | 1,839 bp | + | 46.9% |
| ND6 | Protein-coding gene | 13,791 | 14,312 | 522 bp | − | 47.7% |
| tRNA-Glu | Transfer RNA | 14,313 | 14,381 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,387 | 15,528 | 1,142 bp | + | 47.5% |
| tRNA-Thr | Transfer RNA | 15,529 | 15,600 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,600 | 15,669 | 70 bp | − | – |