Exoglossum maxillingua
Cutlip minnow
GC content
44.05%
Whole genome
Non-coding
1,045 bp
D-loop 958 bp
Where Cutlip minnow sits among 2,335 species
Whole-genome GC content against maximum lifespan. Cutlip minnow has the 2,284th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,648 bp
- GC skew (G − C) / (G + C)
- −0.219
- AT skew (A − T) / (A + T)
- +0.053
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,648 bp
Protein-coding11,403 bp
12S rRNA959 bp
16S rRNA1,686 bp
All tRNA1,555 bp
D-loop958 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 45.44% | −0.228 | −0.083 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 47.08% | −0.366 | +0.056 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.26% | −0.165 | −0.077 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 41.25% | −0.214 | +0.049 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 39.39% | −0.508 | +0.240 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 42.11% | −0.299 | −0.020 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.30% | −0.223 | −0.050 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.99% | −0.261 | −0.063 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 43.77% | −0.292 | −0.054 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,382 bp | 44.36% | −0.282 | +0.004 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 41.39% | −0.313 | +0.046 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 49.62% | −0.382 | +0.430 | |||||
| CYTBCytochrome b | 1,141 bp | 44.44% | −0.290 | −0.022 | |||||
| 12S rRNA12S ribosomal RNA | 959 bp | 50.05% | −0.079 | +0.236 | |||||
| 16S rRNA16S ribosomal RNA | 1,686 bp | 44.60% | −0.051 | +0.259 | |||||
| D-loopControl region (D-loop) | 958 bp | 34.86% | −0.216 | +0.006 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU98
UUC131
Leu L16.3%
UUA125
UUG28
CUU127
CUC95
CUA198
CUG46
Ile I7.1%
AUU171
AUC98
Met M4.7%
AUA123
AUG56
Val V6.4%
GUU64
GUC44
GUA100
GUG36
Ser S6.3%
UCU43
UCC57
UCA75
UCG11
AGU10
AGC43
Pro P5.7%
CCU43
CCC68
CCA91
CCG14
Thr T8.0%
ACU51
ACC105
ACA129
ACG19
Ala A9.0%
GCU51
GCC143
GCA127
GCG22
Tyr Y3.0%
UAU66
UAC49
His H2.7%
CAU31
CAC71
Gln Q2.6%
CAA79
CAG19
Asn N3.0%
AAU56
AAC58
Lys K2.1%
AAA60
AAG19
Asp D2.0%
GAU25
GAC52
Glu E2.7%
GAA70
GAG32
Cys C0.7%
UGU14
UGC13
Trp W3.1%
UGA98
UGG21
Arg R2.0%
CGU9
CGC16
CGA39
CGG12
Gly G6.5%
GGU34
GGC62
GGA100
GGG51
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_037015.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,028 | 959 bp | + | 50.1% |
| tRNA-Val | Transfer RNA | 1,029 | 1,100 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,101 | 2,786 | 1,686 bp | + | 44.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,787 | 2,862 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,864 | 3,838 | 975 bp | + | 45.4% |
| tRNA-Ile | Transfer RNA | 3,843 | 3,913 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,913 | 3,985 | 73 bp | − | – |
| tRNA-Met | Transfer RNA | 3,985 | 4,053 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,054 | 5,098 | 1,045 bp | + | 47.1% |
| tRNA-Trp | Transfer RNA | 5,099 | 5,169 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,171 | 5,239 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,241 | 5,313 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,346 | 5,412 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,415 | 5,485 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,487 | 7,037 | 1,551 bp | + | 43.3% |
| tRNA-Ser (UCN) | Transfer RNA | 7,038 | 7,108 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,112 | 7,183 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,191 | 7,881 | 691 bp | + | 41.3% |
| tRNA-Lys | Transfer RNA | 7,882 | 7,957 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,959 | 8,123 | 165 bp | + | 39.4% |
| ATP6 | Protein-coding gene | 8,117 | 8,800 | 684 bp | + | 42.1% |
| COX3 | Protein-coding gene | 8,800 | 9,583 | 784 bp | + | 46.3% |
| tRNA-Gly | Transfer RNA | 9,584 | 9,655 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,656 | 10,004 | 349 bp | + | 45.0% |
| tRNA-Arg | Transfer RNA | 10,005 | 10,073 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,074 | 10,370 | 297 bp | + | 43.8% |
| ND4 | Protein-coding gene | 10,364 | 11,745 | 1,382 bp | + | 44.4% |
| tRNA-His | Transfer RNA | 11,746 | 11,814 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,817 | 11,882 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,885 | 11,957 | 73 bp | − | – |
| ND5 | Protein-coding gene | 11,958 | 13,793 | 1,836 bp | + | 41.4% |
| ND6 | Protein-coding gene | 13,790 | 14,311 | 522 bp | − | 49.6% |
| tRNA-Glu | Transfer RNA | 14,312 | 14,380 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,386 | 15,526 | 1,141 bp | + | 44.4% |
| tRNA-Thr | Transfer RNA | 15,527 | 15,598 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,597 | 15,665 | 69 bp | − | – |
| D-loop | Control region | 15,666 | 16,623 | 958 bp | – | 34.9% |