Forcipiger flavissimus
Longnose butterflyfish
GC content
45.28%
Whole genome
Non-coding
932 bp
D-loop 843 bp
Where Longnose butterflyfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Longnose butterflyfish has the 1,047th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,600 bp
- GC skew (G − C) / (G + C)
- −0.254
- AT skew (A − T) / (A + T)
- +0.017
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,600 bp
Protein-coding11,467 bp
12S rRNA953 bp
16S rRNA1,694 bp
All tRNA1,554 bp
D-loop843 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.39% | −0.333 | −0.092 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 47.71% | −0.439 | +0.013 | |||||
| COX1Cytochrome c oxidase subunit I | 1,545 bp | 46.28% | −0.234 | −0.094 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.26% | −0.212 | +0.023 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 43.45% | −0.260 | +0.032 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.03% | −0.344 | −0.112 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.73% | −0.253 | −0.056 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.28% | −0.394 | −0.174 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.280 | −0.238 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.84% | −0.362 | −0.021 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,899 bp | 43.02% | −0.339 | −0.002 | |||||
| ND6NADH dehydrogenase subunit 6 | 528 bp | 46.97% | −0.226 | +0.364 | |||||
| CYTBCytochrome b | 1,141 bp | 45.49% | −0.360 | −0.113 | |||||
| 12S rRNA12S ribosomal RNA | 953 bp | 47.85% | −0.053 | +0.147 | |||||
| 16S rRNA16S ribosomal RNA | 1,694 bp | 44.81% | −0.075 | +0.194 | |||||
| D-loopControl region (D-loop) | 843 bp | 39.15% | −0.224 | +0.080 |
Codon usage
Counts per codon, darker is more frequent3,827 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU92
UUC133
Leu L17.8%
UUA79
UUG21
CUU176
CUC141
CUA199
CUG64
Ile I7.4%
AUU169
AUC113
Met M4.0%
AUA106
AUG46
Val V5.7%
GUU64
GUC60
GUA68
GUG28
Ser S6.4%
UCU56
UCC62
UCA57
UCG14
AGU12
AGC44
Pro P5.9%
CCU84
CCC86
CCA46
CCG8
Thr T7.5%
ACU60
ACC109
ACA104
ACG14
Ala A9.2%
GCU71
GCC147
GCA113
GCG21
Tyr Y2.9%
UAU51
UAC60
His H2.7%
CAU41
CAC62
Gln Q2.6%
CAA85
CAG15
Asn N3.1%
AAU48
AAC72
Lys K2.2%
AAA64
AAG20
Asp D2.0%
GAU23
GAC52
Glu E2.7%
GAA69
GAG34
Cys C0.7%
UGU6
UGC21
Trp W3.1%
UGA106
UGG11
Arg R2.1%
CGU10
CGC16
CGA42
CGG12
Gly G6.1%
GGU35
GGC84
GGA79
GGG35
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_063495.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,022 | 953 bp | + | 47.9% |
| tRNA-Val | Transfer RNA | 1,023 | 1,094 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,095 | 2,788 | 1,694 bp | + | 44.8% |
| tRNA-Leu (UUR) | Transfer RNA | 2,789 | 2,861 | 73 bp | + | – |
| ND1 | Protein-coding gene | 2,862 | 3,836 | 975 bp | + | 47.4% |
| tRNA-Ile | Transfer RNA | 3,841 | 3,910 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,910 | 3,980 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,980 | 4,048 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,049 | 5,094 | 1,046 bp | + | 47.7% |
| tRNA-Trp | Transfer RNA | 5,095 | 5,168 | 74 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,169 | 5,237 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,239 | 5,311 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,353 | 5,418 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,419 | 5,488 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,490 | 7,034 | 1,545 bp | + | 46.3% |
| tRNA-Ser (UCN) | Transfer RNA | 7,041 | 7,111 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,115 | 7,184 | 70 bp | + | – |
| COX2 | Protein-coding gene | 7,193 | 7,883 | 691 bp | + | 42.3% |
| tRNA-Lys | Transfer RNA | 7,884 | 7,958 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,962 | 8,129 | 168 bp | + | 43.5% |
| ATP6 | Protein-coding gene | 8,120 | 8,803 | 684 bp | + | 45.0% |
| COX3 | Protein-coding gene | 8,803 | 9,587 | 785 bp | + | 45.7% |
| tRNA-Gly | Transfer RNA | 9,588 | 9,658 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,659 | 10,007 | 349 bp | + | 47.3% |
| tRNA-Arg | Transfer RNA | 10,008 | 10,077 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,078 | 10,374 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,368 | 11,748 | 1,381 bp | + | 45.8% |
| tRNA-His | Transfer RNA | 11,749 | 11,819 | 71 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,820 | 11,887 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,893 | 11,965 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,966 | 13,864 | 1,899 bp | + | 43.0% |
| ND6 | Protein-coding gene | 13,861 | 14,388 | 528 bp | − | 47.0% |
| tRNA-Glu | Transfer RNA | 14,389 | 14,457 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,462 | 15,602 | 1,141 bp | + | 45.5% |
| tRNA-Thr | Transfer RNA | 15,603 | 15,674 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,688 | 15,757 | 70 bp | − | – |
| D-loop | Control region | 15,758 | 16,600 | 843 bp | – | 39.2% |