Galaxias olidus
Mountain Galaxias
GC content
48.01%
Whole genome
Non-coding
925 bp
D-loop 867 bp
Where Mountain Galaxias sits among 2,335 species
Whole-genome GC content against maximum lifespan. Mountain Galaxias has the 2,111th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,516 bp
- GC skew (G − C) / (G + C)
- −0.214
- AT skew (A − T) / (A + T)
- −0.041
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,516 bp
Protein-coding11,410 bp
12S rRNA950 bp
16S rRNA1,677 bp
All tRNA1,554 bp
D-loop867 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.92% | −0.270 | −0.221 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,049 bp | 51.57% | −0.316 | −0.134 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.00% | −0.160 | −0.144 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.74% | −0.207 | −0.038 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.462 | +0.067 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.22% | −0.375 | −0.158 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.55% | −0.255 | −0.051 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.14% | −0.211 | −0.241 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.86% | −0.376 | −0.186 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 47.86% | −0.259 | −0.156 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.82% | −0.303 | −0.092 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.96% | −0.383 | +0.383 | |||||
| CYTBCytochrome b | 1,141 bp | 48.29% | −0.270 | −0.173 | |||||
| 12S rRNA12S ribosomal RNA | 950 bp | 52.32% | −0.038 | +0.170 | |||||
| 16S rRNA16S ribosomal RNA | 1,677 bp | 46.63% | −0.084 | +0.191 | |||||
| D-loopControl region (D-loop) | 867 bp | 41.18% | −0.081 | −0.008 |
Codon usage
Counts per codon, darker is more frequent3,808 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU137
UUC103
Leu L17.0%
UUA77
UUG45
CUU205
CUC132
CUA117
CUG72
Ile I6.3%
AUU143
AUC98
Met M3.7%
AUA55
AUG84
Val V6.6%
GUU74
GUC71
GUA76
GUG30
Ser S6.7%
UCU56
UCC75
UCA49
UCG20
AGU10
AGC46
Pro P5.8%
CCU63
CCC95
CCA49
CCG12
Thr T7.6%
ACU70
ACC119
ACA82
ACG19
Ala A9.7%
GCU84
GCC176
GCA88
GCG23
Tyr Y2.9%
UAU44
UAC68
His H2.7%
CAU32
CAC71
Gln Q2.6%
CAA62
CAG37
Asn N2.8%
AAU37
AAC70
Lys K1.9%
AAA42
AAG31
Asp D2.1%
GAU22
GAC57
Glu E2.5%
GAA64
GAG33
Cys C0.7%
UGU6
UGC20
Trp W3.2%
UGA82
UGG38
Arg R2.0%
CGU6
CGC19
CGA34
CGG19
Gly G6.6%
GGU35
GGC98
GGA56
GGG63
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_081027.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (48.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,018 | 950 bp | + | 52.3% |
| tRNA-Val | Transfer RNA | 1,019 | 1,090 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,767 | 1,677 bp | + | 46.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,768 | 2,842 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,843 | 3,817 | 975 bp | + | 48.9% |
| tRNA-Ile | Transfer RNA | 3,819 | 3,890 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,890 | 3,960 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,960 | 4,028 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,029 | 5,077 | 1,049 bp | + | 51.6% |
| tRNA-Trp | Transfer RNA | 5,078 | 5,148 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,150 | 5,218 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,220 | 5,292 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,324 | 5,388 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,389 | 5,459 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,461 | 7,011 | 1,551 bp | + | 47.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,012 | 7,082 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,086 | 7,158 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,172 | 7,862 | 691 bp | + | 46.7% |
| tRNA-Lys | Transfer RNA | 7,863 | 7,936 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,938 | 8,105 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,096 | 8,779 | 684 bp | + | 47.2% |
| COX3 | Protein-coding gene | 8,779 | 9,563 | 785 bp | + | 49.6% |
| tRNA-Gly | Transfer RNA | 9,564 | 9,635 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,636 | 9,984 | 349 bp | + | 50.1% |
| tRNA-Arg | Transfer RNA | 9,985 | 10,054 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,055 | 10,351 | 297 bp | + | 52.9% |
| ND4 | Protein-coding gene | 10,345 | 11,725 | 1,381 bp | + | 47.9% |
| tRNA-His | Transfer RNA | 11,726 | 11,794 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,795 | 11,862 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,864 | 11,936 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,937 | 13,775 | 1,839 bp | + | 46.8% |
| ND6 | Protein-coding gene | 13,772 | 14,293 | 522 bp | − | 51.0% |
| tRNA-Glu | Transfer RNA | 14,294 | 14,362 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,368 | 15,508 | 1,141 bp | + | 48.3% |
| tRNA-Thr | Transfer RNA | 15,509 | 15,580 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,580 | 15,649 | 70 bp | − | – |
| D-loop | Control region | 15,650 | 16,516 | 867 bp | – | 41.2% |