MitoAge

Gallus gallus

Red junglefowl

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Maximum lifespan
30 yr
AnAge record
mtDNA size
16,784 bp
RefSeq NC_053523.1
GC content
45.95%
Whole genome
Non-coding
1,281 bp
D-loop 1,231 bp

Where Red junglefowl sits among 2,335 species

Whole-genome GC content against maximum lifespan. Red junglefowl has the 447th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Red junglefowl
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,784 bp
GC skew (G − C) / (G + C)
−0.412
AT skew (A − T) / (A + T)
+0.120

Life history

Maximum lifespan
30 years
Adult weight
779.8 g
Basal metabolic rate
6.005 W
Postnatal growth rate
0.037 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00685)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,784 bp
Protein-coding11,373 bp
12S rRNA976 bp
16S rRNA1,622 bp
All tRNA1,541 bp
D-loop1,231 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp27.2%25.3%12.7%34.8%47.49%−0.464+0.035
ND2NADH dehydrogenase subunit 21,039 bp32.6%23.0%8.6%35.8%44.37%−0.614+0.173
COX1Cytochrome c oxidase subunit I1,551 bp27.2%25.6%16.1%31.1%47.20%−0.320+0.031
COX2Cytochrome c oxidase subunit II684 bp29.4%22.8%14.5%33.3%47.81%−0.395+0.126
ATP8ATP synthase F0 subunit 8165 bp34.5%24.2%4.8%36.4%41.21%−0.765+0.175
ATP6ATP synthase F0 subunit 6684 bp28.5%22.5%10.4%38.6%48.98%−0.576+0.117
COX3Cytochrome c oxidase subunit III784 bp27.8%22.8%15.9%33.4%49.36%−0.354+0.098
ND3NADH dehydrogenase subunit 3351 bp27.9%27.1%13.1%31.9%45.01%−0.418+0.016
ND4LNADH dehydrogenase subunit 4L297 bp27.9%24.9%12.5%34.7%47.14%−0.471+0.057
ND4NADH dehydrogenase subunit 41,378 bp30.0%23.8%10.2%36.1%46.23%−0.560+0.115
ND5NADH dehydrogenase subunit 51,818 bp31.0%23.5%10.6%35.0%45.55%−0.536+0.137
ND6NADH dehydrogenase subunit 6522 bp41.6%10.5%9.4%38.5%47.89%−0.608+0.596
CYTBCytochrome b1,143 bp27.6%24.1%12.0%36.4%48.38%−0.505+0.068
12S rRNA12S ribosomal RNA976 bp32.4%20.5%18.2%28.9%47.13%−0.226+0.225
16S rRNA16S ribosomal RNA1,622 bp33.4%20.3%18.2%28.1%46.30%−0.212+0.242
D-loopControl region (D-loop)1,231 bp26.5%33.4%13.5%26.6%40.13%−0.328−0.115

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU59
UUC160
Leu L17.5%
UUA64
UUG15
CUU80
CUC183
CUA287
CUG35
Ile I8.0%
AUU86
AUC219
Met M4.5%
AUA136
AUG33
Val V4.2%
GUU31
GUC45
GUA57
GUG27
Ser S7.8%
UCU36
UCC100
UCA99
UCG4
AGU3
AGC53
Pro P6.2%
CCU21
CCC107
CCA104
CCG3
Thr T9.2%
ACU55
ACC165
ACA127
ACG4
Ala A7.6%
GCU41
GCC145
GCA94
GCG9
Tyr Y2.8%
UAU26
UAC79
His H3.0%
CAU25
CAC87
Gln Q2.3%
CAA80
CAG6
Asn N3.3%
AAU21
AAC104
Lys K2.4%
AAA79
AAG11
Asp D1.7%
GAU11
GAC53
Glu E2.5%
GAA78
GAG16
Cys C0.7%
UGU5
UGC23
Trp W2.8%
UGA96
UGG12
Arg R1.9%
CGU1
CGC16
CGA44
CGG10
Gly G5.7%
GGU20
GGC79
GGA88
GGG29
Stop 0.3%
UAA9
UAG0
AGA0
AGG1

Genome map

38 annotated features in NC_053523.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,045976 bp+47.1%
tRNA-ValTransfer RNA1,0461,11873 bp+–
16S rRNARibosomal RNA1,1192,7401,622 bp+46.3%
tRNA-Leu (UUR)Transfer RNA2,7412,81474 bp+–
ND1Protein-coding gene2,8243,798975 bp+47.5%
tRNA-IleTransfer RNA3,7993,87072 bp+–
tRNA-GlnTransfer RNA3,8763,94671 bp−–
tRNA-MetTransfer RNA3,9464,01469 bp+–
ND2Protein-coding gene4,0155,0531,039 bp+44.4%
tRNA-TrpTransfer RNA5,0545,12976 bp+–
tRNA-AlaTransfer RNA5,1365,20469 bp−–
tRNA-AsnTransfer RNA5,2085,28073 bp−–
tRNA-CysTransfer RNA5,2825,34766 bp−–
tRNA-TyrTransfer RNA5,3475,41771 bp−–
COX1Protein-coding gene5,4196,9691,551 bp+47.2%
tRNA-Ser (UCN)Transfer RNA6,9617,03575 bp−–
tRNA-AspTransfer RNA7,0387,10669 bp+–
COX2Protein-coding gene7,1087,791684 bp+47.8%
tRNA-LysTransfer RNA7,7937,86068 bp+–
ATP8Protein-coding gene7,8628,026165 bp+41.2%
ATP6Protein-coding gene8,0178,700684 bp+49.0%
COX3Protein-coding gene8,7009,483784 bp+49.4%
tRNA-GlyTransfer RNA9,4859,55268 bp+–
ND3Protein-coding gene9,5539,904352 bp+45.0%
tRNA-ArgTransfer RNA9,9069,97368 bp+–
ND4LProtein-coding gene9,97410,270297 bp+47.1%
ND4Protein-coding gene10,26411,6411,378 bp+46.2%
tRNA-HisTransfer RNA11,64211,71069 bp+–
tRNA-Ser (AGY)Transfer RNA11,71211,77665 bp+–
tRNA-Leu (CUN)Transfer RNA11,77811,84871 bp+–
ND5Protein-coding gene11,84913,6661,818 bp+45.6%
CYTBProtein-coding gene13,67114,8131,143 bp+48.4%
tRNA-ThrTransfer RNA14,81714,88569 bp+–
tRNA-ProTransfer RNA14,88614,95570 bp−–
ND6Protein-coding gene14,96215,483522 bp−47.9%
tRNA-GluTransfer RNA15,48615,55368 bp−–
D-loopControl region15,55416,7841,231 bp–40.1%

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