Gari elongata
Elongate sunset clam
GC content
37.78%
Whole genome
Non-coding
1,469 bp
Including the D-loop
Where Elongate sunset clam sits among 2,335 species
Whole-genome GC content against maximum lifespan. Elongate sunset clam has the 2,283rd longest lifespan of them.
- This species
- All other species
Base composition
Whole genome16,766 bp
- GC skew (G − C) / (G + C)
- +0.348
- AT skew (A − T) / (A + T)
- −0.235
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,766 bp
Protein-coding11,673 bp
12S rRNA874 bp
16S rRNA1,298 bp
All tRNA1,452 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 924 bp | 35.97% | +0.386 | −0.347 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,059 bp | 38.06% | +0.469 | −0.378 | |||||
| COX1Cytochrome c oxidase subunit I | 1,713 bp | 38.88% | +0.303 | −0.270 | |||||
| COX2Cytochrome c oxidase subunit II | 870 bp | 38.28% | +0.339 | −0.158 | |||||
| ATP6ATP synthase F0 subunit 6 | 720 bp | 37.64% | +0.395 | −0.350 | |||||
| COX3Cytochrome c oxidase subunit III | 882 bp | 41.95% | +0.308 | −0.379 | |||||
| ND3NADH dehydrogenase subunit 3 | 363 bp | 36.36% | +0.424 | −0.325 | |||||
| ND4LNADH dehydrogenase subunit 4L | 291 bp | 35.40% | +0.495 | −0.383 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,326 bp | 36.58% | +0.419 | −0.337 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,734 bp | 35.35% | +0.396 | −0.269 | |||||
| ND6NADH dehydrogenase subunit 6 | 558 bp | 44.98% | +0.482 | −0.440 | |||||
| CYTBCytochrome b | 1,233 bp | 37.66% | +0.164 | −0.242 | |||||
| 12S rRNA12S ribosomal RNA | 874 bp | 37.76% | +0.279 | +0.007 | |||||
| 16S rRNA16S ribosomal RNA | 1,298 bp | 39.21% | +0.383 | −0.085 |
Codon usage
Counts per codon, darker is more frequent3,889 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F8.1%
UUU277
UUC38
Leu L13.8%
UUA193
UUG190
CUU81
CUC7
CUA39
CUG25
Ile I5.8%
AUU207
AUC17
Met M5.6%
AUA103
AUG114
Val V10.1%
GUU183
GUC20
GUA96
GUG94
Ser S9.9%
UCU95
UCC5
UCA33
UCG17
AGU66
AGC20
AGA71
AGG77
Pro P3.5%
CCU80
CCC6
CCA28
CCG21
Thr T3.2%
ACU74
ACC9
ACA29
ACG14
Ala A5.5%
GCU131
GCC19
GCA39
GCG24
Tyr Y4.6%
UAU148
UAC31
His H2.3%
CAU69
CAC21
Gln Q1.4%
CAA16
CAG39
Asn N2.5%
AAU83
AAC16
Lys K1.9%
AAA1
AAG74
Asp D2.5%
GAU80
GAC16
Glu E2.3%
GAA28
GAG60
Cys C2.1%
UGU67
UGC15
Trp W2.7%
UGA55
UGG50
Arg R2.0%
CGU36
CGC6
CGA20
CGG16
Gly G10.0%
GGU147
GGC30
GGA90
GGG121
Stop 0.3%
UAA1
UAG11
Genome map
36 annotated features in NC_042422.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding12
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (37.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 36 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| COX1 | Protein-coding gene | 1 | 1,713 | 1,713 bp | + | 38.9% |
| ND4 | Protein-coding gene | 1,773 | 3,098 | 1,326 bp | + | 36.6% |
| tRNA-His | Transfer RNA | 3,099 | 3,163 | 65 bp | + | – |
| tRNA-Ser | Transfer RNA | 3,189 | 3,254 | 66 bp | + | – |
| tRNA-Glu | Transfer RNA | 3,253 | 3,320 | 68 bp | + | – |
| ND3 | Protein-coding gene | 3,321 | 3,683 | 363 bp | + | 36.4% |
| tRNA-Ile | Transfer RNA | 3,684 | 3,752 | 69 bp | + | – |
| tRNA-Lys | Transfer RNA | 3,753 | 3,817 | 65 bp | + | – |
| ND4L | Protein-coding gene | 3,819 | 4,109 | 291 bp | + | 35.4% |
| tRNA-Tyr | Transfer RNA | 4,110 | 4,175 | 66 bp | + | – |
| tRNA-Thr | Transfer RNA | 4,172 | 4,233 | 62 bp | + | – |
| tRNA-Leu | Transfer RNA | 4,234 | 4,300 | 67 bp | + | – |
| tRNA-Asp | Transfer RNA | 4,300 | 4,366 | 67 bp | + | – |
| tRNA-Leu | Transfer RNA | 4,365 | 4,431 | 67 bp | + | – |
| ND1 | Protein-coding gene | 4,435 | 5,358 | 924 bp | + | 36.0% |
| tRNA-Asn | Transfer RNA | 5,359 | 5,424 | 66 bp | + | – |
| ND5 | Protein-coding gene | 5,428 | 7,161 | 1,734 bp | + | 35.4% |
| tRNA-Arg | Transfer RNA | 7,167 | 7,231 | 65 bp | + | – |
| CYTB | Protein-coding gene | 7,233 | 8,465 | 1,233 bp | + | 37.7% |
| COX2 | Protein-coding gene | 8,467 | 9,336 | 870 bp | + | 38.3% |
| tRNA-Val | Transfer RNA | 9,337 | 9,404 | 68 bp | + | – |
| tRNA-Trp | Transfer RNA | 9,405 | 9,470 | 66 bp | + | – |
| tRNA-Gly | Transfer RNA | 9,471 | 9,536 | 66 bp | + | – |
| 12S rRNA | Ribosomal RNA | 9,538 | 10,411 | 874 bp | + | 37.8% |
| tRNA-Met | Transfer RNA | 11,554 | 11,618 | 65 bp | + | – |
| tRNA-Ser | Transfer RNA | 11,779 | 11,852 | 74 bp | + | – |
| ND6 | Protein-coding gene | 11,861 | 12,418 | 558 bp | + | 45.0% |
| 16S rRNA | Ribosomal RNA | 12,419 | 13,716 | 1,298 bp | + | 39.2% |
| ATP6 | Protein-coding gene | 13,717 | 14,436 | 720 bp | + | 37.6% |
| COX3 | Protein-coding gene | 14,463 | 15,344 | 882 bp | + | 42.0% |
| ND2 | Protein-coding gene | 15,366 | 16,424 | 1,059 bp | + | 38.1% |
| tRNA-Pro | Transfer RNA | 16,425 | 16,491 | 67 bp | + | – |
| tRNA-Gln | Transfer RNA | 16,504 | 16,571 | 68 bp | + | – |
| tRNA-Cys | Transfer RNA | 16,570 | 16,633 | 64 bp | + | – |
| tRNA-Ala | Transfer RNA | 16,632 | 16,700 | 69 bp | + | – |
| tRNA-Phe | Transfer RNA | 16,702 | 16,766 | 65 bp | + | – |