Gerres filamentosus
Whipfin silverbiddy
GC content
46.48%
Whole genome
Non-coding
1,168 bp
D-loop 956 bp
Where Whipfin silverbiddy sits among 2,335 species
Whole-genome GC content against maximum lifespan. Whipfin silverbiddy has the 1,763rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,795 bp
- GC skew (G − C) / (G + C)
- −0.292
- AT skew (A − T) / (A + T)
- +0.032
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,795 bp
Protein-coding11,402 bp
12S rRNA972 bp
16S rRNA1,690 bp
All tRNA1,563 bp
D-loop956 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.87% | −0.357 | −0.031 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 48.66% | −0.454 | +0.024 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 46.74% | −0.194 | −0.073 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.02% | −0.233 | −0.013 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 42.26% | −0.465 | +0.072 | |||||
| ATP6ATP synthase F0 subunit 6 | 678 bp | 48.23% | −0.486 | −0.077 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.41% | −0.305 | −0.032 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 49.28% | −0.395 | −0.198 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.14% | −0.429 | −0.032 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.20% | −0.386 | −0.031 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.53% | −0.423 | +0.005 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.70% | −0.349 | +0.341 | |||||
| CYTBCytochrome b | 1,141 bp | 46.63% | −0.365 | −0.074 | |||||
| 12S rRNA12S ribosomal RNA | 972 bp | 49.90% | −0.118 | +0.125 | |||||
| 16S rRNA16S ribosomal RNA | 1,690 bp | 45.62% | −0.136 | +0.212 | |||||
| D-loopControl region (D-loop) | 956 bp | 36.09% | −0.183 | +0.051 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.5%
UUU92
UUC154
Leu L17.4%
UUA72
UUG17
CUU157
CUC175
CUA180
CUG61
Ile I7.2%
AUU146
AUC128
Met M4.1%
AUA92
AUG65
Val V5.4%
GUU50
GUC88
GUA46
GUG20
Ser S6.6%
UCU40
UCC80
UCA72
UCG8
AGU11
AGC40
Pro P5.8%
CCU56
CCC95
CCA50
CCG19
Thr T7.6%
ACU40
ACC127
ACA105
ACG16
Ala A9.1%
GCU70
GCC132
GCA138
GCG8
Tyr Y2.8%
UAU37
UAC71
His H2.9%
CAU30
CAC79
Gln Q2.4%
CAA73
CAG18
Asn N2.9%
AAU34
AAC78
Lys K2.0%
AAA74
AAG2
Asp D2.0%
GAU24
GAC51
Glu E2.7%
GAA83
GAG19
Cys C0.8%
UGU3
UGC29
Trp W3.1%
UGA106
UGG13
Arg R2.0%
CGU4
CGC23
CGA44
CGG4
Gly G6.5%
GGU20
GGC106
GGA86
GGG37
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_037846.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 71 | 71 bp | + | – |
| 12S rRNA | Ribosomal RNA | 72 | 1,043 | 972 bp | + | 49.9% |
| tRNA-Val | Transfer RNA | 1,044 | 1,114 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,115 | 2,804 | 1,690 bp | + | 45.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,806 | 2,879 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,880 | 3,854 | 975 bp | + | 46.9% |
| tRNA-Ile | Transfer RNA | 3,860 | 3,931 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,954 | 4,028 | 75 bp | − | – |
| tRNA-Met | Transfer RNA | 4,072 | 4,141 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,142 | 5,187 | 1,046 bp | + | 48.7% |
| tRNA-Trp | Transfer RNA | 5,188 | 5,259 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,261 | 5,329 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,331 | 5,403 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,439 | 5,505 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,506 | 5,576 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,578 | 7,128 | 1,551 bp | + | 46.7% |
| tRNA-Ser (UCN) | Transfer RNA | 7,129 | 7,199 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,203 | 7,274 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,284 | 7,974 | 691 bp | + | 46.0% |
| tRNA-Lys | Transfer RNA | 7,975 | 8,048 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 8,050 | 8,217 | 168 bp | + | 42.3% |
| ATP6 | Protein-coding gene | 8,208 | 8,885 | 678 bp | + | 48.2% |
| COX3 | Protein-coding gene | 8,968 | 9,752 | 785 bp | + | 48.4% |
| tRNA-Gly | Transfer RNA | 9,753 | 9,822 | 70 bp | + | – |
| ND3 | Protein-coding gene | 9,823 | 10,171 | 349 bp | + | 49.3% |
| tRNA-Arg | Transfer RNA | 10,172 | 10,240 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,241 | 10,537 | 297 bp | + | 47.1% |
| ND4 | Protein-coding gene | 10,531 | 11,911 | 1,381 bp | + | 46.2% |
| tRNA-His | Transfer RNA | 11,912 | 11,980 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,981 | 12,048 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 12,053 | 12,125 | 73 bp | + | – |
| ND5 | Protein-coding gene | 12,126 | 13,964 | 1,839 bp | + | 47.5% |
| ND6 | Protein-coding gene | 13,961 | 14,482 | 522 bp | − | 47.7% |
| tRNA-Glu | Transfer RNA | 14,483 | 14,551 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,556 | 15,696 | 1,141 bp | + | 46.6% |
| tRNA-Thr | Transfer RNA | 15,697 | 15,768 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,768 | 15,839 | 72 bp | − | – |
| D-loop | Control region | 15,840 | 16,795 | 956 bp | – | 36.1% |