Gillichthys mirabilis
Longjaw mudsucker
GC content
46.28%
Whole genome
Non-coding
902 bp
D-loop 828 bp
Where Longjaw mudsucker sits among 2,335 species
Whole-genome GC content against maximum lifespan. Longjaw mudsucker has the 2,260th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,481 bp
- GC skew (G − C) / (G + C)
- −0.265
- AT skew (A − T) / (A + T)
- −0.015
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,481 bp
Protein-coding11,410 bp
12S rRNA948 bp
16S rRNA1,682 bp
All tRNA1,553 bp
D-loop828 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.56% | −0.322 | −0.179 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 50.91% | −0.437 | −0.101 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 46.01% | −0.186 | −0.137 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.86% | −0.245 | −0.050 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 42.42% | −0.514 | +0.032 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 44.35% | −0.424 | −0.124 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 47.32% | −0.224 | −0.065 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.42% | −0.337 | −0.300 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.84% | −0.430 | −0.068 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 49.31% | −0.339 | −0.120 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 44.70% | −0.358 | −0.064 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.89% | −0.408 | +0.434 | |||||
| CYTBCytochrome b | 1,141 bp | 46.54% | −0.333 | −0.170 | |||||
| 12S rRNA12S ribosomal RNA | 948 bp | 47.36% | −0.100 | +0.182 | |||||
| 16S rRNA16S ribosomal RNA | 1,682 bp | 46.55% | −0.124 | +0.224 | |||||
| D-loopControl region (D-loop) | 828 bp | 36.59% | −0.102 | +0.044 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.5%
UUU141
UUC107
Leu L17.9%
UUA70
UUG37
CUU210
CUC184
CUA135
CUG46
Ile I6.7%
AUU167
AUC87
Met M4.0%
AUA78
AUG75
Val V5.5%
GUU70
GUC57
GUA53
GUG31
Ser S6.3%
UCU69
UCC75
UCA37
UCG4
AGU12
AGC44
Pro P6.0%
CCU64
CCC117
CCA41
CCG5
Thr T8.1%
ACU59
ACC115
ACA128
ACG6
Ala A9.0%
GCU90
GCC142
GCA108
GCG3
Tyr Y2.9%
UAU53
UAC57
His H2.8%
CAU28
CAC78
Gln Q2.6%
CAA74
CAG25
Asn N3.1%
AAU46
AAC72
Lys K1.9%
AAA46
AAG25
Asp D1.9%
GAU24
GAC47
Glu E2.5%
GAA57
GAG37
Cys C0.7%
UGU10
UGC15
Trp W3.0%
UGA79
UGG34
Arg R2.0%
CGU12
CGC23
CGA30
CGG10
Gly G6.6%
GGU22
GGC93
GGA60
GGG75
Stop 0.2%
UAA8
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_012906.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,016 | 948 bp | + | 47.4% |
| tRNA-Val | Transfer RNA | 1,017 | 1,088 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,089 | 2,770 | 1,682 bp | + | 46.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,771 | 2,844 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,845 | 3,819 | 975 bp | + | 46.6% |
| tRNA-Ile | Transfer RNA | 3,823 | 3,891 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,892 | 3,961 | 70 bp | − | – |
| tRNA-Met | Transfer RNA | 3,961 | 4,029 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,030 | 5,076 | 1,047 bp | + | 50.9% |
| tRNA-Trp | Transfer RNA | 5,077 | 5,147 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,150 | 5,218 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,220 | 5,292 | 73 bp | + | – |
| tRNA-Cys | Transfer RNA | 5,328 | 5,392 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,393 | 5,463 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,465 | 7,018 | 1,554 bp | + | 46.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,019 | 7,089 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,093 | 7,164 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,168 | 7,858 | 691 bp | + | 44.9% |
| tRNA-Lys | Transfer RNA | 7,859 | 7,934 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,935 | 8,099 | 165 bp | + | 42.4% |
| ATP6 | Protein-coding gene | 8,096 | 8,776 | 681 bp | + | 44.4% |
| COX3 | Protein-coding gene | 8,776 | 9,559 | 784 bp | + | 47.3% |
| tRNA-Gly | Transfer RNA | 9,560 | 9,630 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,631 | 9,979 | 349 bp | + | 48.4% |
| tRNA-Arg | Transfer RNA | 9,980 | 10,048 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,049 | 10,345 | 297 bp | + | 50.8% |
| ND4 | Protein-coding gene | 10,339 | 11,719 | 1,381 bp | + | 49.3% |
| tRNA-His | Transfer RNA | 11,727 | 11,795 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,796 | 11,863 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,868 | 11,940 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,934 | 13,772 | 1,839 bp | + | 44.7% |
| ND6 | Protein-coding gene | 13,769 | 14,290 | 522 bp | − | 47.9% |
| tRNA-Glu | Transfer RNA | 14,299 | 14,371 | 73 bp | − | – |
| CYTB | Protein-coding gene | 14,365 | 15,505 | 1,141 bp | + | 46.5% |
| tRNA-Thr | Transfer RNA | 15,513 | 15,583 | 71 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,584 | 15,653 | 70 bp | − | – |
| D-loop | Control region | 15,654 | 16,481 | 828 bp | – | 36.6% |