MitoAge

Globicephala macrorhynchus

Short-finned pilot whale

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Maximum lifespan
63 yr
AnAge record
mtDNA size
16,390 bp
RefSeq NC_019578.2
GC content
38.88%
Whole genome
Non-coding
975 bp
D-loop 913 bp

Where Short-finned pilot whale sits among 2,335 species

Whole-genome GC content against maximum lifespan. Short-finned pilot whale has the 82nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Short-finned pilot whale
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,390 bp
GC skew (G − C) / (G + C)
−0.350
AT skew (A − T) / (A + T)
+0.084

Life history

Maximum lifespan
63 years
Adult weight
2.2 t
Birth weight
60 kg
Female sexual maturity
9.5 years
Male sexual maturity
14.6 years
Gestation or incubation
452 days
Litter or clutch size
1
Litters per year
0.2

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02288)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,390 bp
Protein-coding11,349 bp
12S rRNA973 bp
16S rRNA1,579 bp
All tRNA1,519 bp
D-loop913 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp31.6%27.5%11.5%29.5%40.96%−0.439+0.069
ND2NADH dehydrogenase subunit 21,042 bp35.5%26.5%7.3%30.7%38.00%−0.616+0.146
COX1Cytochrome c oxidase subunit I1,551 bp28.8%31.1%16.1%24.0%40.10%−0.196−0.040
COX2Cytochrome c oxidase subunit II684 bp33.8%26.9%13.3%26.0%39.33%−0.323+0.113
ATP8ATP synthase F0 subunit 8192 bp32.8%26.0%9.4%31.8%41.15%−0.544+0.115
ATP6ATP synthase F0 subunit 6681 bp31.6%29.7%10.0%28.8%38.77%−0.485+0.031
COX3Cytochrome c oxidase subunit III785 bp28.2%28.5%13.1%30.2%43.31%−0.394−0.007
ND3NADH dehydrogenase subunit 3346 bp31.2%29.5%11.0%28.3%39.31%−0.441+0.029
ND4LNADH dehydrogenase subunit 4L297 bp30.6%31.6%11.1%26.6%37.71%−0.411−0.016
ND4NADH dehydrogenase subunit 41,378 bp32.1%31.1%9.8%27.1%36.87%−0.469+0.016
ND5NADH dehydrogenase subunit 51,824 bp32.5%28.7%9.5%29.2%38.76%−0.508+0.062
ND6NADH dehydrogenase subunit 6528 bp42.6%20.8%7.2%29.4%36.55%−0.606+0.343
CYTBCytochrome b1,140 bp31.1%27.7%12.0%29.2%41.23%−0.417+0.057
12S rRNA12S ribosomal RNA973 bp36.4%22.4%18.1%23.1%41.21%−0.122+0.238
16S rRNA16S ribosomal RNA1,579 bp37.5%25.4%16.8%20.3%37.11%−0.096+0.192
D-loopControl region (D-loop)913 bp30.2%32.6%13.8%23.3%37.13%−0.257−0.038

Codon usage

Counts per codon, darker is more frequent

3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU106
UUC138
Leu L16.9%
UUA128
UUG14
CUU100
CUC99
CUA280
CUG20
Ile I8.3%
AUU144
AUC173
Met M6.2%
AUA201
AUG35
Val V4.3%
GUU34
GUC41
GUA75
GUG15
Ser S6.7%
UCU49
UCC67
UCA86
UCG3
AGU17
AGC34
Pro P5.3%
CCU55
CCC73
CCA71
CCG2
Thr T9.2%
ACU76
ACC95
ACA172
ACG6
Ala A6.4%
GCU65
GCC82
GCA95
GCG3
Tyr Y3.4%
UAU73
UAC56
His H2.5%
CAU32
CAC63
Gln Q2.5%
CAA89
CAG7
Asn N4.2%
AAU68
AAC91
Lys K2.6%
AAA86
AAG12
Asp D1.8%
GAU24
GAC45
Glu E2.4%
GAA76
GAG14
Cys C0.6%
UGU12
UGC11
Trp W2.7%
UGA98
UGG6
Arg R1.7%
CGU12
CGC14
CGA36
CGG2
Gly G5.5%
GGU43
GGC63
GGA89
GGG15
Stop 0.2%
UAA6
UAG1
AGA2
AGG0

Genome map

38 annotated features in NC_019578.2

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (38.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17272 bp+–
12S rRNARibosomal RNA731,045973 bp+41.2%
tRNA-ValTransfer RNA1,0461,11267 bp+–
16S rRNARibosomal RNA1,1132,6911,579 bp+37.1%
tRNA-Leu (UUR)Transfer RNA2,6922,76776 bp+–
ND1Protein-coding gene2,7683,724957 bp+41.0%
tRNA-IleTransfer RNA3,7293,79769 bp+–
tRNA-GlnTransfer RNA3,7953,86773 bp−–
tRNA-MetTransfer RNA3,8693,93769 bp+–
ND2Protein-coding gene3,9384,9791,042 bp+38.0%
tRNA-TrpTransfer RNA4,9805,04869 bp+–
tRNA-AlaTransfer RNA5,0545,12269 bp−–
tRNA-AsnTransfer RNA5,1245,19774 bp−–
tRNA-CysTransfer RNA5,2295,29567 bp−–
tRNA-TyrTransfer RNA5,2965,36166 bp−–
COX1Protein-coding gene5,3636,9131,551 bp+40.1%
tRNA-Ser (UCN)Transfer RNA6,9096,97769 bp−–
tRNA-AspTransfer RNA6,9857,05268 bp+–
COX2Protein-coding gene7,0537,736684 bp+39.3%
tRNA-LysTransfer RNA7,7407,80768 bp+–
ATP8Protein-coding gene7,8098,000192 bp+41.2%
ATP6Protein-coding gene7,9708,650681 bp+38.8%
COX3Protein-coding gene8,6509,434785 bp+43.3%
tRNA-GlyTransfer RNA9,4359,50369 bp+–
ND3Protein-coding gene9,5049,849346 bp+39.3%
tRNA-ArgTransfer RNA9,8519,92070 bp+–
ND4LProtein-coding gene9,92110,217297 bp+37.7%
ND4Protein-coding gene10,21111,5881,378 bp+36.9%
tRNA-HisTransfer RNA11,58911,65870 bp+–
tRNA-Ser (AGY)Transfer RNA11,65911,72062 bp+–
tRNA-Leu (CUN)Transfer RNA11,72111,79070 bp+–
ND5Protein-coding gene11,79113,6141,824 bp+38.8%
ND6Protein-coding gene13,59814,125528 bp−36.6%
tRNA-GluTransfer RNA14,12614,19469 bp−–
CYTBProtein-coding gene14,19915,3381,140 bp+41.2%
tRNA-ThrTransfer RNA15,33915,40870 bp+–
tRNA-ProTransfer RNA15,40815,47467 bp−–
D-loopControl region15,47516,387913 bp–37.1%

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