Glyptosternon maculatum
GC content
41.80%
Whole genome
Non-coding
969 bp
D-loop 73 bp
Where Glyptosternon maculatum sits among 2,335 species
Whole-genome GC content against maximum lifespan. Glyptosternon maculatum has the 1,365th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,539 bp
- GC skew (G − C) / (G + C)
- −0.270
- AT skew (A − T) / (A + T)
- +0.084
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,539 bp
Protein-coding11,387 bp
12S rRNA958 bp
16S rRNA1,674 bp
All tRNA1,551 bp
D-loop73 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 41.44% | −0.347 | +0.030 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 41.44% | −0.441 | +0.147 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 42.68% | −0.172 | −0.033 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 40.52% | −0.243 | +0.056 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 35.12% | −0.458 | +0.193 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 41.37% | −0.413 | +0.047 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 44.52% | −0.266 | −0.011 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.13% | −0.338 | −0.056 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.82% | −0.324 | −0.039 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 41.20% | −0.325 | +0.057 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,827 bp | 40.56% | −0.406 | +0.064 | |||||
| ND6NADH dehydrogenase subunit 6 | 519 bp | 43.55% | −0.584 | +0.461 | |||||
| CYTBCytochrome b | 1,138 bp | 40.42% | −0.352 | +0.015 | |||||
| 12S rRNA12S ribosomal RNA | 958 bp | 45.72% | −0.110 | +0.200 | |||||
| 16S rRNA16S ribosomal RNA | 1,674 bp | 42.00% | −0.084 | +0.244 | |||||
| D-loopControl region (D-loop) | 73 bp | 30.14% | −0.455 | +0.098 |
Codon usage
Counts per codon, darker is more frequent3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU120
UUC111
Leu L16.6%
UUA134
UUG22
CUU81
CUC62
CUA298
CUG33
Ile I8.0%
AUU191
AUC112
Met M4.7%
AUA141
AUG38
Val V5.6%
GUU57
GUC26
GUA112
GUG19
Ser S5.9%
UCU36
UCC60
UCA83
UCG3
AGU12
AGC29
Pro P5.5%
CCU32
CCC86
CCA86
CCG6
Thr T7.9%
ACU40
ACC116
ACA136
ACG8
Ala A8.7%
GCU56
GCC144
GCA122
GCG10
Tyr Y3.1%
UAU69
UAC47
His H2.8%
CAU37
CAC69
Gln Q2.7%
CAA93
CAG8
Asn N3.5%
AAU48
AAC84
Lys K2.1%
AAA74
AAG7
Asp D2.0%
GAU31
GAC45
Glu E2.6%
GAA86
GAG11
Cys C0.7%
UGU12
UGC15
Trp W3.2%
UGA101
UGG21
Arg R1.9%
CGU5
CGC9
CGA52
CGG6
Gly G6.4%
GGU36
GGC63
GGA101
GGG42
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_021597.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (41.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,027 | 958 bp | + | 45.7% |
| tRNA-Val | Transfer RNA | 1,028 | 1,099 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,100 | 2,773 | 1,674 bp | + | 42.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,774 | 2,848 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,849 | 3,823 | 975 bp | + | 41.4% |
| tRNA-Ile | Transfer RNA | 3,830 | 3,901 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,901 | 3,971 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,970 | 4,038 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,041 | 5,085 | 1,045 bp | + | 41.4% |
| tRNA-Trp | Transfer RNA | 5,086 | 5,156 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,159 | 5,227 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,229 | 5,301 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,332 | 5,398 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,401 | 5,469 | 69 bp | − | – |
| COX1 | Protein-coding gene | 5,471 | 7,021 | 1,551 bp | + | 42.7% |
| tRNA-Ser (UCN) | Transfer RNA | 7,023 | 7,091 | 69 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,097 | 7,168 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,183 | 7,873 | 691 bp | + | 40.5% |
| tRNA-Lys | Transfer RNA | 7,874 | 7,947 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,949 | 8,116 | 168 bp | + | 35.1% |
| ATP6 | Protein-coding gene | 8,107 | 8,790 | 684 bp | + | 41.4% |
| COX3 | Protein-coding gene | 8,790 | 9,573 | 784 bp | + | 44.5% |
| tRNA-Gly | Transfer RNA | 9,574 | 9,645 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,646 | 9,994 | 349 bp | + | 44.1% |
| tRNA-Arg | Transfer RNA | 9,995 | 10,065 | 71 bp | + | – |
| ND4L | Protein-coding gene | 10,066 | 10,362 | 297 bp | + | 48.8% |
| ND4 | Protein-coding gene | 10,356 | 11,736 | 1,381 bp | + | 41.2% |
| tRNA-His | Transfer RNA | 11,737 | 11,806 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,807 | 11,873 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,881 | 11,953 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,954 | 13,780 | 1,827 bp | + | 40.6% |
| ND6 | Protein-coding gene | 13,777 | 14,295 | 519 bp | − | 43.6% |
| tRNA-Glu | Transfer RNA | 14,296 | 14,364 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,367 | 15,504 | 1,138 bp | + | 40.4% |
| tRNA-Thr | Transfer RNA | 15,505 | 15,576 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,575 | 15,644 | 70 bp | − | – |
| D-loop | Control region | 15,647 | 15,719 | 73 bp | – | 30.1% |