Gnathopogon strigatus
Manchurian gudgeon
GC content
43.27%
Whole genome
Non-coding
992 bp
D-loop 927 bp
Where Manchurian gudgeon sits among 2,335 species
Whole-genome GC content against maximum lifespan. Manchurian gudgeon has the 2,231st longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,602 bp
- GC skew (G − C) / (G + C)
- −0.204
- AT skew (A − T) / (A + T)
- +0.051
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,602 bp
Protein-coding11,403 bp
12S rRNA959 bp
16S rRNA1,686 bp
All tRNA1,562 bp
D-loop927 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 42.87% | −0.230 | −0.027 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 45.55% | −0.345 | +0.083 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.39% | −0.141 | −0.084 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.27% | −0.191 | +0.020 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 38.79% | −0.375 | +0.129 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 42.02% | −0.296 | −0.045 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.05% | −0.219 | −0.054 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 42.69% | −0.221 | −0.100 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 45.79% | −0.265 | −0.056 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,382 bp | 42.84% | −0.260 | +0.005 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 41.50% | −0.302 | +0.045 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.44% | −0.362 | +0.441 | |||||
| CYTBCytochrome b | 1,141 bp | 42.51% | −0.258 | −0.058 | |||||
| 12S rRNA12S ribosomal RNA | 959 bp | 48.70% | −0.084 | +0.244 | |||||
| 16S rRNA16S ribosomal RNA | 1,686 bp | 43.65% | −0.049 | +0.259 | |||||
| D-loopControl region (D-loop) | 927 bp | 34.63% | −0.202 | −0.017 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU126
UUC103
Leu L16.2%
UUA119
UUG21
CUU124
CUC80
CUA212
CUG60
Ile I7.4%
AUU204
AUC79
Met M4.8%
AUA121
AUG61
Val V6.3%
GUU68
GUC40
GUA99
GUG32
Ser S6.4%
UCU44
UCC56
UCA76
UCG12
AGU13
AGC43
Pro P5.7%
CCU31
CCC70
CCA95
CCG19
Thr T7.8%
ACU47
ACC101
ACA123
ACG25
Ala A8.8%
GCU63
GCC139
GCA115
GCG18
Tyr Y2.9%
UAU63
UAC49
His H2.7%
CAU39
CAC65
Gln Q2.5%
CAA77
CAG18
Asn N3.3%
AAU66
AAC58
Lys K2.0%
AAA66
AAG11
Asp D2.1%
GAU31
GAC47
Glu E2.7%
GAA79
GAG25
Cys C0.7%
UGU10
UGC16
Trp W3.2%
UGA97
UGG24
Arg R2.0%
CGU7
CGC12
CGA39
CGG18
Gly G6.4%
GGU32
GGC56
GGA99
GGG55
Stop 0.2%
UAA4
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_022189.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,028 | 959 bp | + | 48.7% |
| tRNA-Val | Transfer RNA | 1,029 | 1,100 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,101 | 2,786 | 1,686 bp | + | 43.7% |
| tRNA-Leu (UUR) | Transfer RNA | 2,787 | 2,862 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,864 | 3,838 | 975 bp | + | 42.9% |
| tRNA-Ile | Transfer RNA | 3,843 | 3,914 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,913 | 3,983 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,985 | 4,053 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,054 | 5,098 | 1,045 bp | + | 45.6% |
| tRNA-Trp | Transfer RNA | 5,099 | 5,169 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,172 | 5,240 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,242 | 5,314 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,347 | 5,414 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,417 | 5,487 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,489 | 7,039 | 1,551 bp | + | 43.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,040 | 7,110 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,114 | 7,185 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,200 | 7,890 | 691 bp | + | 43.3% |
| tRNA-Lys | Transfer RNA | 7,891 | 7,966 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,968 | 8,132 | 165 bp | + | 38.8% |
| ATP6 | Protein-coding gene | 8,126 | 8,808 | 683 bp | + | 42.0% |
| COX3 | Protein-coding gene | 8,809 | 9,592 | 784 bp | + | 46.1% |
| tRNA-Gly | Transfer RNA | 9,593 | 9,664 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,665 | 10,013 | 349 bp | + | 42.7% |
| tRNA-Arg | Transfer RNA | 10,014 | 10,084 | 71 bp | + | – |
| ND4L | Protein-coding gene | 10,085 | 10,381 | 297 bp | + | 45.8% |
| ND4 | Protein-coding gene | 10,375 | 11,756 | 1,382 bp | + | 42.8% |
| tRNA-His | Transfer RNA | 11,757 | 11,825 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,826 | 11,894 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,896 | 11,968 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,969 | 13,804 | 1,836 bp | + | 41.5% |
| ND6 | Protein-coding gene | 13,801 | 14,322 | 522 bp | − | 44.4% |
| tRNA-Glu | Transfer RNA | 14,323 | 14,391 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,394 | 15,534 | 1,141 bp | + | 42.5% |
| tRNA-Thr | Transfer RNA | 15,535 | 15,606 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,606 | 15,675 | 70 bp | − | – |
| D-loop | Control region | 15,676 | 16,602 | 927 bp | – | 34.6% |