MitoAge

Gonatodes albogularis

Yellowhead gecko

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Maximum lifespan
5.6 yr
AnAge record
mtDNA size
16,830 bp
RefSeq NC_035153.1
GC content
48.07%
Whole genome
Non-coding
1,592 bp
D-loop 60 bp

Where Yellowhead gecko sits among 2,335 species

Whole-genome GC content against maximum lifespan. Yellowhead gecko has the 1,961st longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Yellowhead gecko
  • This species
  • Other reptiles
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,830 bp
GC skew (G − C) / (G + C)
−0.349
AT skew (A − T) / (A + T)
+0.107

Life history

Maximum lifespan
5.6 years
Adult weight
1.9 g

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 03573)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,830 bp
Protein-coding11,273 bp
12S rRNA926 bp
16S rRNA1,533 bp
All tRNA1,516 bp
D-loop60 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp28.0%24.1%15.3%32.6%47.86%−0.362+0.074
ND2NADH dehydrogenase subunit 21,039 bp32.1%22.4%10.7%34.7%45.43%−0.530+0.178
COX1Cytochrome c oxidase subunit I1,554 bp22.7%27.7%20.1%29.5%49.61%−0.191−0.098
COX2Cytochrome c oxidase subunit II688 bp26.2%23.5%16.7%33.6%50.29%−0.335+0.053
ATP8ATP synthase F0 subunit 8156 bp32.1%23.1%7.7%37.2%44.87%−0.657+0.163
ATP6ATP synthase F0 subunit 6680 bp27.6%25.1%13.4%33.8%47.21%−0.433+0.047
COX3Cytochrome c oxidase subunit III784 bp23.1%26.5%18.2%32.1%50.38%−0.276−0.069
ND3NADH dehydrogenase subunit 3348 bp25.9%28.4%15.2%30.5%45.69%−0.333−0.048
ND4LNADH dehydrogenase subunit 4L297 bp24.6%24.6%15.8%35.0%50.84%−0.3770.000
ND4NADH dehydrogenase subunit 41,364 bp27.6%24.9%12.5%35.0%47.51%−0.475+0.050
ND5NADH dehydrogenase subunit 51,776 bp29.3%22.3%13.0%35.4%48.42%−0.463+0.135
ND6NADH dehydrogenase subunit 6516 bp41.3%13.8%11.6%33.3%44.96%−0.483+0.500
CYTBCytochrome b1,137 bp26.2%25.9%13.7%34.2%47.93%−0.428+0.007
12S rRNA12S ribosomal RNA926 bp30.9%18.6%19.4%31.1%50.54%−0.231+0.249
16S rRNA16S ribosomal RNA1,533 bp32.7%16.9%17.5%32.9%50.42%−0.307+0.318
D-loopControl region (D-loop)60 bp31.7%15.0%10.0%43.3%53.33%−0.625+0.357

Codon usage

Counts per codon, darker is more frequent

3,763 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.3%
UUU89
UUC111
Leu L18.5%
UUA75
UUG29
CUU122
CUC150
CUA249
CUG73
Ile I6.0%
AUU105
AUC122
Met M4.9%
AUA133
AUG50
Val V5.5%
GUU50
GUC58
GUA65
GUG34
Ser S5.3%
UCU30
UCC51
UCA50
UCG13
AGU10
AGC47
Pro P6.3%
CCU20
CCC90
CCA116
CCG11
Thr T10.1%
ACU43
ACC165
ACA158
ACG15
Ala A9.4%
GCU51
GCC167
GCA120
GCG14
Tyr Y3.0%
UAU37
UAC75
His H3.0%
CAU20
CAC94
Gln Q2.5%
CAA73
CAG21
Asn N3.1%
AAU29
AAC89
Lys K1.9%
AAA55
AAG15
Asp D1.8%
GAU15
GAC53
Glu E2.1%
GAA48
GAG30
Cys C0.9%
UGU11
UGC24
Trp W2.6%
UGA73
UGG23
Arg R2.0%
CGU9
CGC35
CGA25
CGG5
Gly G5.6%
GGU28
GGC111
GGA37
GGG34
Stop 0.2%
UAA4
UAG2
AGA1
AGG1

Genome map

40 annotated features in NC_035153.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop3
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (48.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 40 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA71996926 bp+50.5%
tRNA-ValTransfer RNA9971,06266 bp+–
16S rRNARibosomal RNA1,0632,5951,533 bp+50.4%
tRNA-Leu (UUR)Transfer RNA2,5962,66974 bp+–
ND1Protein-coding gene2,6723,628957 bp+47.9%
tRNA-IleTransfer RNA3,6353,70672 bp+–
tRNA-GlnTransfer RNA3,7063,77772 bp−–
tRNA-MetTransfer RNA3,7773,84468 bp+–
ND2Protein-coding gene3,8454,8831,039 bp+45.4%
tRNA-TrpTransfer RNA4,8844,95067 bp+–
tRNA-AlaTransfer RNA4,9525,02069 bp−–
tRNA-AsnTransfer RNA5,0225,09473 bp−–
tRNA-CysTransfer RNA5,1235,18361 bp−–
tRNA-TyrTransfer RNA5,1835,25068 bp−–
COX1Protein-coding gene5,2526,8051,554 bp+49.6%
tRNA-Ser (UCN)Transfer RNA6,7966,86368 bp−–
tRNA-AspTransfer RNA6,8706,93768 bp+–
COX2Protein-coding gene6,9387,625688 bp+50.3%
tRNA-LysTransfer RNA7,6267,69671 bp+–
ATP8Protein-coding gene7,6987,853156 bp+44.9%
ATP6Protein-coding gene7,8448,523680 bp+47.2%
COX3Protein-coding gene8,5249,307784 bp+50.4%
tRNA-GlyTransfer RNA9,3089,37467 bp+–
ND3Protein-coding gene9,3759,722348 bp+45.7%
tRNA-ArgTransfer RNA9,7249,79168 bp+–
ND4LProtein-coding gene9,79410,090297 bp+50.8%
ND4Protein-coding gene10,08411,4471,364 bp+47.5%
tRNA-HisTransfer RNA11,44811,51770 bp+–
tRNA-Ser (AGY)Transfer RNA11,51811,58265 bp+–
tRNA-Leu (CUN)Transfer RNA11,58511,65672 bp+–
ND5Protein-coding gene11,66113,4361,776 bp+48.4%
ND6Protein-coding gene13,43113,946516 bp−45.0%
tRNA-GluTransfer RNA13,94714,01771 bp−–
CYTBProtein-coding gene14,02115,1571,137 bp+47.9%
tRNA-ThrTransfer RNA15,16115,23676 bp+–
tRNA-ProTransfer RNA15,44415,50663 bp−–
D-loopControl region16,24416,26623 bp–53.3%
D-loopControl region16,47116,48919 bp–53.3%
D-loopControl region16,52416,54118 bp–53.3%

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