MitoAge

Grammomys dolichurus

Woodland mouse

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Maximum lifespan
4.4 yr
AnAge record
mtDNA size
16,333 bp
RefSeq NC_053797.1
GC content
36.69%
Whole genome
Non-coding
985 bp
D-loop 934 bp

Where Woodland mouse sits among 2,335 species

Whole-genome GC content against maximum lifespan. Woodland mouse has the 2,069th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Woodland mouse
  • This species
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,333 bp
GC skew (G − C) / (G + C)
−0.326
AT skew (A − T) / (A + T)
+0.106

Life history

Maximum lifespan
4.4 years
Adult weight
60 g
Birth weight
4.2 g
Female sexual maturity
73 days
Gestation or incubation
24 days
Litter or clutch size
3
Postnatal growth rate
0.0245 per day

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 03039)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,333 bp
Protein-coding11,335 bp
12S rRNA948 bp
16S rRNA1,568 bp
All tRNA1,501 bp
D-loop934 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp32.5%29.7%10.6%27.2%37.80%−0.440+0.044
ND2NADH dehydrogenase subunit 21,036 bp38.1%25.9%7.7%28.3%36.00%−0.571+0.192
COX1Cytochrome c oxidase subunit I1,545 bp30.7%29.5%15.7%24.1%39.74%−0.212+0.020
COX2Cytochrome c oxidase subunit II684 bp34.2%28.5%14.0%23.2%37.28%−0.247+0.091
ATP8ATP synthase F0 subunit 8192 bp41.1%28.6%5.2%25.0%30.21%−0.655+0.179
ATP6ATP synthase F0 subunit 6681 bp33.3%29.2%10.1%27.3%37.45%−0.459+0.066
COX3Cytochrome c oxidase subunit III785 bp30.3%28.8%15.5%25.4%40.89%−0.240+0.026
ND3NADH dehydrogenase subunit 3348 bp34.5%30.5%12.6%22.4%35.06%−0.279+0.062
ND4LNADH dehydrogenase subunit 4L297 bp31.0%33.0%10.1%25.9%36.03%−0.439−0.032
ND4NADH dehydrogenase subunit 41,378 bp34.8%29.0%8.8%27.4%36.14%−0.514+0.091
ND5NADH dehydrogenase subunit 51,824 bp34.9%29.7%9.5%25.9%35.42%−0.461+0.080
ND6NADH dehydrogenase subunit 6519 bp43.4%21.6%8.3%26.8%35.07%−0.527+0.335
CYTBCytochrome b1,144 bp32.6%28.8%11.8%26.8%38.64%−0.389+0.063
12S rRNA12S ribosomal RNA948 bp36.8%25.9%16.9%20.4%37.24%−0.093+0.173
16S rRNA16S ribosomal RNA1,568 bp40.7%24.8%16.1%18.4%34.50%−0.065+0.242
D-loopControl region (D-loop)934 bp33.0%32.3%11.8%22.9%34.69%−0.321+0.010

Codon usage

Counts per codon, darker is more frequent

3,794 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU112
UUC116
Leu L15.7%
UUA144
UUG8
CUU80
CUC69
CUA270
CUG23
Ile I9.4%
AUU215
AUC142
Met M7.0%
AUA237
AUG27
Val V3.9%
GUU30
GUC26
GUA85
GUG7
Ser S7.7%
UCU43
UCC49
UCA134
UCG5
AGU19
AGC42
Pro P5.1%
CCU43
CCC38
CCA111
CCG2
Thr T8.6%
ACU68
ACC78
ACA170
ACG9
Ala A6.3%
GCU53
GCC96
GCA89
GCG2
Tyr Y3.4%
UAU63
UAC65
His H2.5%
CAU38
CAC58
Gln Q2.2%
CAA80
CAG3
Asn N4.4%
AAU50
AAC116
Lys K2.6%
AAA99
AAG1
Asp D1.9%
GAU36
GAC36
Glu E2.5%
GAA83
GAG13
Cys C0.8%
UGU14
UGC18
Trp W2.7%
UGA96
UGG6
Arg R1.7%
CGU7
CGC14
CGA41
CGG1
Gly G5.4%
GGU35
GGC40
GGA101
GGG30
Stop 0.2%
UAA8
UAG0
AGA0
AGG0

Genome map

38 annotated features in NC_053797.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (36.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16767 bp+–
12S rRNARibosomal RNA681,015948 bp+37.2%
tRNA-ValTransfer RNA1,0161,08469 bp+–
16S rRNARibosomal RNA1,0852,6521,568 bp+34.5%
tRNA-Leu (UUR)Transfer RNA2,6532,72775 bp+–
ND1Protein-coding gene2,7293,683955 bp+37.8%
tRNA-IleTransfer RNA3,6843,75269 bp+–
tRNA-GlnTransfer RNA3,7503,82071 bp−–
tRNA-MetTransfer RNA3,8253,89369 bp+–
ND2Protein-coding gene3,8944,9291,036 bp+36.0%
tRNA-TrpTransfer RNA4,9304,99768 bp+–
tRNA-AlaTransfer RNA4,9985,06669 bp−–
tRNA-AsnTransfer RNA5,0695,13971 bp−–
tRNA-CysTransfer RNA5,1705,23768 bp−–
tRNA-TyrTransfer RNA5,2385,30467 bp−–
COX1Protein-coding gene5,3066,8501,545 bp+39.7%
tRNA-Ser (UCN)Transfer RNA6,8486,91669 bp−–
tRNA-AspTransfer RNA6,9206,98768 bp+–
COX2Protein-coding gene6,9897,672684 bp+37.3%
tRNA-LysTransfer RNA7,6767,74065 bp+–
ATP8Protein-coding gene7,7427,933192 bp+30.2%
ATP6Protein-coding gene7,9038,583681 bp+37.5%
COX3Protein-coding gene8,5839,367785 bp+40.9%
tRNA-GlyTransfer RNA9,3679,43569 bp+–
ND3Protein-coding gene9,4369,783348 bp+35.1%
tRNA-ArgTransfer RNA9,7859,85470 bp+–
ND4LProtein-coding gene9,85610,152297 bp+36.0%
ND4Protein-coding gene10,14611,5231,378 bp+36.1%
tRNA-HisTransfer RNA11,52411,59168 bp+–
tRNA-Ser (AGY)Transfer RNA11,59211,65059 bp+–
tRNA-Leu (CUN)Transfer RNA11,65111,72070 bp+–
ND5Protein-coding gene11,72113,5441,824 bp+35.4%
ND6Protein-coding gene13,53114,049519 bp−35.1%
tRNA-GluTransfer RNA14,05014,11869 bp−–
CYTBProtein-coding gene14,12215,2651,144 bp+38.6%
tRNA-ThrTransfer RNA15,26615,33267 bp+–
tRNA-ProTransfer RNA15,33315,39967 bp−–
D-loopControl region15,40016,333934 bp–34.7%

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