MitoAge

Antigone vipio

White-naped crane

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Maximum lifespan
45 yr
AnAge record
mtDNA size
16,678 bp
RefSeq NC_021368.1
GC content
44.44%
Whole genome
Non-coding
1,212 bp
D-loop 1,133 bp

Where White-naped crane sits among 2,335 species

Whole-genome GC content against maximum lifespan. White-naped crane has the 197th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %White-naped crane
  • This species
  • Other birds
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,678 bp
GC skew (G − C) / (G + C)
−0.396
AT skew (A − T) / (A + T)
+0.138

Life history

Maximum lifespan
45 years
Adult weight
5.4 kg
Female sexual maturity
3 years
Male sexual maturity
3 years
Gestation or incubation
31 days
Litter or clutch size
2
Postnatal growth rate
0.057 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00715)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Renamed in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)
Earlier name
Grus vipio

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,678 bp
Protein-coding11,360 bp
12S rRNA972 bp
16S rRNA1,595 bp
All tRNA1,550 bp
D-loop1,133 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1966 bp28.2%26.6%12.5%32.7%45.24%−0.446+0.028
ND2NADH dehydrogenase subunit 21,039 bp33.0%24.6%9.6%32.7%42.35%−0.545+0.145
COX1Cytochrome c oxidase subunit I1,551 bp28.7%25.3%15.5%30.4%45.97%−0.324+0.062
COX2Cytochrome c oxidase subunit II684 bp30.4%24.1%14.5%31.0%45.47%−0.363+0.115
ATP8ATP synthase F0 subunit 8174 bp33.3%27.0%4.6%35.1%39.66%−0.768+0.105
ATP6ATP synthase F0 subunit 6684 bp30.8%25.6%9.4%34.2%43.57%−0.570+0.093
COX3Cytochrome c oxidase subunit III784 bp28.2%24.6%15.1%32.1%47.19%−0.362+0.068
ND3NADH dehydrogenase subunit 3351 bp29.9%25.9%10.3%33.9%44.16%−0.535+0.071
ND4LNADH dehydrogenase subunit 4L297 bp31.6%24.6%11.8%32.0%43.77%−0.462+0.126
ND4NADH dehydrogenase subunit 41,368 bp32.2%23.3%9.7%34.7%44.44%−0.563+0.161
ND5NADH dehydrogenase subunit 51,815 bp32.7%23.7%11.3%32.3%43.64%−0.480+0.159
ND6NADH dehydrogenase subunit 6522 bp41.0%11.5%9.0%38.5%47.51%−0.621+0.562
CYTBCytochrome b1,143 bp28.8%24.9%11.9%34.4%46.28%−0.486+0.072
12S rRNA12S ribosomal RNA972 bp32.2%19.8%19.4%28.6%48.05%−0.191+0.240
16S rRNA16S ribosomal RNA1,595 bp34.3%21.2%18.0%26.5%44.51%−0.192+0.236
D-loopControl region (D-loop)1,133 bp30.5%28.6%14.5%26.4%40.87%−0.292+0.033

Codon usage

Counts per codon, darker is more frequent

3,792 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU59
UUC162
Leu L17.3%
UUA87
UUG22
CUU59
CUC155
CUA306
CUG26
Ile I8.0%
AUU93
AUC212
Met M4.7%
AUA148
AUG29
Val V4.2%
GUU35
GUC38
GUA69
GUG16
Ser S7.5%
UCU28
UCC95
UCA103
UCG4
AGU12
AGC43
Pro P5.9%
CCU35
CCC63
CCA120
CCG4
Thr T9.5%
ACU58
ACC147
ACA149
ACG5
Ala A7.3%
GCU50
GCC123
GCA95
GCG10
Tyr Y2.8%
UAU32
UAC76
His H3.0%
CAU20
CAC94
Gln Q2.6%
CAA89
CAG9
Asn N3.3%
AAU29
AAC98
Lys K2.3%
AAA84
AAG5
Asp D1.7%
GAU20
GAC43
Glu E2.5%
GAA84
GAG12
Cys C0.7%
UGU11
UGC14
Trp W2.9%
UGA101
UGG8
Arg R1.8%
CGU11
CGC16
CGA40
CGG3
Gly G5.9%
GGU18
GGC84
GGA80
GGG40
Stop 0.3%
UAA6
UAG2
AGA1
AGG2

Genome map

38 annotated features in NC_021368.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (44.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17373 bp+–
12S rRNARibosomal RNA741,045972 bp+48.1%
tRNA-ValTransfer RNA1,0461,11873 bp+–
16S rRNARibosomal RNA1,1192,7131,595 bp+44.5%
tRNA-Leu (UUR)Transfer RNA2,7142,78875 bp+–
ND1Protein-coding gene2,7933,758966 bp+45.2%
tRNA-IleTransfer RNA3,7573,82872 bp+–
tRNA-GlnTransfer RNA3,8373,90771 bp−–
tRNA-MetTransfer RNA3,9073,97569 bp+–
ND2Protein-coding gene3,9765,0141,039 bp+42.4%
tRNA-TrpTransfer RNA5,0155,08571 bp+–
tRNA-AlaTransfer RNA5,0875,15569 bp−–
tRNA-AsnTransfer RNA5,1585,23073 bp−–
tRNA-CysTransfer RNA5,2335,29967 bp−–
tRNA-TyrTransfer RNA5,2995,36971 bp−–
COX1Protein-coding gene5,3716,9211,551 bp+46.0%
tRNA-Ser (UCN)Transfer RNA6,9136,98674 bp−–
tRNA-AspTransfer RNA6,9897,05769 bp+–
COX2Protein-coding gene7,0587,741684 bp+45.5%
tRNA-LysTransfer RNA7,7437,81270 bp+–
ATP8Protein-coding gene7,8147,987174 bp+39.7%
ATP6Protein-coding gene7,9788,661684 bp+43.6%
COX3Protein-coding gene8,6619,444784 bp+47.2%
tRNA-GlyTransfer RNA9,4459,51369 bp+–
ND3Protein-coding gene9,5149,865352 bp+44.2%
tRNA-ArgTransfer RNA9,8689,93568 bp+–
ND4LProtein-coding gene9,93610,232297 bp+43.8%
ND4Protein-coding gene10,22611,5931,368 bp+44.4%
tRNA-HisTransfer RNA11,61111,68070 bp+–
tRNA-Ser (AGY)Transfer RNA11,68111,74767 bp+–
tRNA-Leu (CUN)Transfer RNA11,74711,81771 bp+–
ND5Protein-coding gene11,81813,6321,815 bp+43.6%
CYTBProtein-coding gene13,64214,7841,143 bp+46.3%
tRNA-ThrTransfer RNA14,78914,85870 bp+–
tRNA-ProTransfer RNA14,87414,94370 bp−–
ND6Protein-coding gene14,95015,471522 bp−47.5%
tRNA-GluTransfer RNA15,47615,54671 bp−–
D-loopControl region15,54616,6781,133 bp–40.9%

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