Haematopus ostralegus
Eurasian oystercatcher
GC content
45.09%
Whole genome
Non-coding
1,334 bp
D-loop 1,249 bp
Where Eurasian oystercatcher sits among 2,335 species
Whole-genome GC content against maximum lifespan. Eurasian oystercatcher has the 215th longest lifespan of them.
- This species
- Other birds
- Other classes
Base composition
Whole genome16,798 bp
- GC skew (G − C) / (G + C)
- −0.387
- AT skew (A − T) / (A + T)
- +0.145
Life history
- Maximum lifespan
- 43.3 years
- Adult weight
- 480 g
- Basal metabolic rate
- 2.91 W
- Female sexual maturity
- 3 years
- Male sexual maturity
- 3 years
- Postnatal growth rate
- 0.119 per day
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 00448)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,798 bp
Protein-coding11,373 bp
12S rRNA968 bp
16S rRNA1,587 bp
All tRNA1,547 bp
D-loop1,249 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 978 bp | 47.34% | −0.430 | +0.052 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,039 bp | 43.50% | −0.562 | +0.179 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 48.10% | −0.319 | +0.058 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 45.76% | −0.355 | +0.127 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 40.00% | −0.758 | +0.192 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.05% | −0.556 | +0.089 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.17% | −0.320 | +0.062 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 42.17% | −0.486 | +0.074 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 43.10% | −0.500 | +0.089 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 45.28% | −0.554 | +0.151 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,815 bp | 44.57% | −0.513 | +0.175 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.70% | −0.558 | +0.575 | |||||
| CYTBCytochrome b | 1,143 bp | 47.33% | −0.460 | +0.093 | |||||
| 12S rRNA12S ribosomal RNA | 968 bp | 48.04% | −0.157 | +0.205 | |||||
| 16S rRNA16S ribosomal RNA | 1,587 bp | 44.93% | −0.173 | +0.247 | |||||
| D-loopControl region (D-loop) | 1,249 bp | 40.11% | −0.325 | +0.091 |
Codon usage
Counts per codon, darker is more frequent3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU49
UUC175
Leu L17.1%
UUA71
UUG21
CUU41
CUC157
CUA316
CUG42
Ile I7.9%
AUU66
AUC234
Met M4.7%
AUA148
AUG29
Val V4.2%
GUU28
GUC45
GUA70
GUG18
Ser S7.6%
UCU35
UCC95
UCA97
UCG10
AGU7
AGC46
Pro P5.7%
CCU33
CCC70
CCA103
CCG9
Thr T9.5%
ACU50
ACC150
ACA152
ACG10
Ala A7.5%
GCU52
GCC122
GCA103
GCG7
Tyr Y3.0%
UAU31
UAC83
His H2.9%
CAU31
CAC78
Gln Q2.5%
CAA88
CAG7
Asn N3.6%
AAU19
AAC119
Lys K2.3%
AAA79
AAG8
Asp D1.6%
GAU16
GAC45
Glu E2.5%
GAA79
GAG15
Cys C0.7%
UGU5
UGC23
Trp W2.8%
UGA97
UGG10
Arg R1.9%
CGU8
CGC21
CGA39
CGG4
Gly G5.8%
GGU32
GGC75
GGA75
GGG38
Stop 0.3%
UAA7
UAG1
AGA0
AGG2
Genome map
38 annotated features in NC_034237.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 71 | 71 bp | + | – |
| 12S rRNA | Ribosomal RNA | 73 | 1,040 | 968 bp | + | 48.0% |
| tRNA-Val | Transfer RNA | 1,041 | 1,112 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,113 | 2,699 | 1,587 bp | + | 44.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,700 | 2,773 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,776 | 3,753 | 978 bp | + | 47.3% |
| tRNA-Ile | Transfer RNA | 3,752 | 3,823 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,833 | 3,903 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,903 | 3,971 | 69 bp | + | – |
| ND2 | Protein-coding gene | 3,972 | 5,010 | 1,039 bp | + | 43.5% |
| tRNA-Trp | Transfer RNA | 5,011 | 5,080 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,082 | 5,150 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,153 | 5,225 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,230 | 5,296 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,296 | 5,366 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,368 | 6,918 | 1,551 bp | + | 48.1% |
| tRNA-Ser (UCN) | Transfer RNA | 6,910 | 6,983 | 74 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,986 | 7,054 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,056 | 7,739 | 684 bp | + | 45.8% |
| tRNA-Lys | Transfer RNA | 7,741 | 7,811 | 71 bp | + | – |
| ATP8 | Protein-coding gene | 7,813 | 7,977 | 165 bp | + | 40.0% |
| ATP6 | Protein-coding gene | 7,968 | 8,651 | 684 bp | + | 46.1% |
| COX3 | Protein-coding gene | 8,651 | 9,434 | 784 bp | + | 46.2% |
| tRNA-Gly | Transfer RNA | 9,435 | 9,503 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,504 | 9,855 | 352 bp | + | 42.2% |
| tRNA-Arg | Transfer RNA | 9,858 | 9,926 | 69 bp | + | – |
| ND4L | Protein-coding gene | 9,928 | 10,224 | 297 bp | + | 43.1% |
| ND4 | Protein-coding gene | 10,218 | 11,595 | 1,378 bp | + | 45.3% |
| tRNA-His | Transfer RNA | 11,596 | 11,665 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,666 | 11,731 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,731 | 11,801 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,802 | 13,616 | 1,815 bp | + | 44.6% |
| CYTB | Protein-coding gene | 13,630 | 14,772 | 1,143 bp | + | 47.3% |
| tRNA-Thr | Transfer RNA | 14,778 | 14,847 | 70 bp | + | – |
| tRNA-Pro | Transfer RNA | 14,862 | 14,931 | 70 bp | − | – |
| ND6 | Protein-coding gene | 14,953 | 15,474 | 522 bp | − | 47.7% |
| tRNA-Glu | Transfer RNA | 15,478 | 15,549 | 72 bp | − | – |
| D-loop | Control region | 15,550 | 16,798 | 1,249 bp | – | 40.1% |