Harpiosquilla harpax
Robber harpiosquillid mantis shrimp
GC content
30.26%
Whole genome
Non-coding
903 bp
D-loop 801 bp
Where Robber harpiosquillid mantis shrimp sits among 2,335 species
Whole-genome GC content against maximum lifespan. Robber harpiosquillid mantis shrimp has the 2,293rd longest lifespan of them.
- This species
- All other species
Base composition
Whole genome15,714 bp
- GC skew (G − C) / (G + C)
- −0.131
- AT skew (A − T) / (A + T)
- +0.003
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome15,714 bp
Protein-coding11,139 bp
12S rRNA836 bp
16S rRNA1,359 bp
All tRNA1,483 bp
D-loop801 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 939 bp | 33.87% | −0.151 | +0.227 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,002 bp | 29.64% | −0.178 | −0.146 | |||||
| COX1Cytochrome c oxidase subunit I | 1,534 bp | 35.98% | +0.022 | −0.149 | |||||
| COX2Cytochrome c oxidase subunit II | 688 bp | 34.01% | −0.009 | −0.088 | |||||
| ATP8ATP synthase F0 subunit 8 | 159 bp | 24.53% | −0.436 | +0.033 | |||||
| ATP6ATP synthase F0 subunit 6 | 678 bp | 30.83% | −0.158 | −0.156 | |||||
| COX3Cytochrome c oxidase subunit III | 789 bp | 35.11% | −0.025 | −0.129 | |||||
| ND3NADH dehydrogenase subunit 3 | 354 bp | 30.51% | −0.074 | −0.138 | |||||
| ND4LNADH dehydrogenase subunit 4L | 300 bp | 31.33% | −0.277 | +0.233 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,341 bp | 30.65% | −0.246 | +0.219 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,713 bp | 29.19% | −0.200 | +0.187 | |||||
| ND6NADH dehydrogenase subunit 6 | 520 bp | 22.31% | −0.207 | −0.129 | |||||
| CYTBCytochrome b | 1,137 bp | 34.57% | −0.038 | −0.180 | |||||
| 12S rRNA12S ribosomal RNA | 836 bp | 29.19% | −0.213 | −0.014 | |||||
| 16S rRNA16S ribosomal RNA | 1,359 bp | 24.95% | −0.245 | +0.024 | |||||
| D-loopControl region (D-loop) | 801 bp | 18.85% | −0.272 | +0.040 |
Codon usage
Counts per codon, darker is more frequent3,717 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F8.4%
UUU253
UUC59
Leu L15.4%
UUA323
UUG60
CUU81
CUC15
CUA72
CUG21
Ile I7.9%
AUU258
AUC36
Met M6.4%
AUA178
AUG60
Val V6.5%
GUU97
GUC15
GUA105
GUG25
Ser S8.9%
UCU117
UCC17
UCA53
UCG8
AGU53
AGC7
AGA57
AGG17
Pro P3.6%
CCU89
CCC16
CCA26
CCG4
Thr T5.5%
ACU90
ACC19
ACA82
ACG14
Ala A6.3%
GCU128
GCC31
GCA62
GCG14
Tyr Y4.1%
UAU106
UAC47
His H2.2%
CAU44
CAC39
Gln Q1.9%
CAA53
CAG16
Asn N3.6%
AAU97
AAC36
Lys K2.2%
AAA76
AAG7
Asp D2.0%
GAU46
GAC30
Glu E2.3%
GAA65
GAG20
Cys C1.1%
UGU37
UGC4
Trp W2.7%
UGA83
UGG16
Arg R1.7%
CGU19
CGC2
CGA36
CGG5
Gly G7.0%
GGU66
GGC29
GGA111
GGG55
Stop 0.3%
UAA10
UAG0
Genome map
38 annotated features in NC_006916.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (30.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| COX1 | Protein-coding gene | 1 | 1,534 | 1,534 bp | + | 36.0% |
| tRNA-Leu (UUR) | Transfer RNA | 1,535 | 1,601 | 67 bp | + | – |
| COX2 | Protein-coding gene | 1,604 | 2,291 | 688 bp | + | 34.0% |
| tRNA-Lys | Transfer RNA | 2,292 | 2,359 | 68 bp | + | – |
| tRNA-Asp | Transfer RNA | 2,362 | 2,430 | 69 bp | + | – |
| ATP8 | Protein-coding gene | 2,431 | 2,589 | 159 bp | + | 24.5% |
| ATP6 | Protein-coding gene | 2,583 | 3,260 | 678 bp | + | 30.8% |
| COX3 | Protein-coding gene | 3,260 | 4,048 | 789 bp | + | 35.1% |
| tRNA-Gly | Transfer RNA | 4,048 | 4,113 | 66 bp | + | – |
| ND3 | Protein-coding gene | 4,114 | 4,467 | 354 bp | + | 30.5% |
| tRNA-Ala | Transfer RNA | 4,470 | 4,534 | 65 bp | + | – |
| tRNA-Arg | Transfer RNA | 4,540 | 4,604 | 65 bp | + | – |
| tRNA-Asn | Transfer RNA | 4,613 | 4,681 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 4,682 | 4,749 | 68 bp | + | – |
| tRNA-Glu | Transfer RNA | 4,750 | 4,817 | 68 bp | + | – |
| tRNA-Phe | Transfer RNA | 4,819 | 4,886 | 68 bp | − | – |
| ND5 | Protein-coding gene | 4,886 | 6,598 | 1,713 bp | − | 29.2% |
| tRNA-His | Transfer RNA | 6,617 | 6,683 | 67 bp | − | – |
| ND4 | Protein-coding gene | 6,683 | 8,023 | 1,341 bp | − | 30.7% |
| ND4L | Protein-coding gene | 8,017 | 8,316 | 300 bp | − | 31.3% |
| tRNA-Thr | Transfer RNA | 8,319 | 8,386 | 68 bp | + | – |
| tRNA-Pro | Transfer RNA | 8,387 | 8,452 | 66 bp | − | – |
| ND6 | Protein-coding gene | 8,461 | 8,980 | 520 bp | + | 22.3% |
| CYTB | Protein-coding gene | 8,981 | 10,117 | 1,137 bp | + | 34.6% |
| tRNA-Ser (UCN) | Transfer RNA | 10,117 | 10,187 | 71 bp | + | – |
| ND1 | Protein-coding gene | 10,220 | 11,158 | 939 bp | − | 33.9% |
| tRNA-Leu (CUN) | Transfer RNA | 11,159 | 11,223 | 65 bp | − | – |
| 16S rRNA | Ribosomal RNA | 11,224 | 12,582 | 1,359 bp | − | 25.0% |
| tRNA-Val | Transfer RNA | 12,583 | 12,653 | 71 bp | − | – |
| 12S rRNA | Ribosomal RNA | 12,654 | 13,489 | 836 bp | − | 29.2% |
| D-loop | Control region | 13,490 | 14,290 | 801 bp | – | 18.9% |
| tRNA-Ile | Transfer RNA | 14,291 | 14,359 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 14,357 | 14,424 | 68 bp | − | – |
| tRNA-Met | Transfer RNA | 14,439 | 14,507 | 69 bp | + | – |
| ND2 | Protein-coding gene | 14,508 | 15,509 | 1,002 bp | + | 29.6% |
| tRNA-Trp | Transfer RNA | 15,508 | 15,577 | 70 bp | + | – |
| tRNA-Cys | Transfer RNA | 15,582 | 15,644 | 63 bp | − | – |
| tRNA-Tyr | Transfer RNA | 15,649 | 15,714 | 66 bp | − | – |