Hemilepidotus jordani
Yellow Irish lord
GC content
47.25%
Whole genome
Non-coding
1,363 bp
Including the D-loop
Where Yellow Irish lord sits among 2,335 species
Whole-genome GC content against maximum lifespan. Yellow Irish lord has the 467th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,959 bp
- GC skew (G − C) / (G + C)
- −0.276
- AT skew (A − T) / (A + T)
- +0.014
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,959 bp
Protein-coding11,407 bp
12S rRNA946 bp
16S rRNA1,694 bp
All tRNA1,549 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 50.46% | −0.374 | −0.085 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 49.33% | −0.450 | −0.015 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.84% | −0.237 | −0.095 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 45.73% | −0.291 | +0.029 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.385 | +0.089 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 50.44% | −0.472 | −0.032 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.79% | −0.305 | −0.055 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 49.28% | −0.291 | −0.186 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.360 | −0.129 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 48.52% | −0.343 | −0.049 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 48.18% | −0.359 | −0.009 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.74% | −0.418 | +0.403 | |||||
| CYTBCytochrome b | 1,141 bp | 48.64% | −0.348 | −0.092 | |||||
| 12S rRNA12S ribosomal RNA | 946 bp | 49.05% | −0.103 | +0.207 | |||||
| 16S rRNA16S ribosomal RNA | 1,694 bp | 46.99% | −0.088 | +0.194 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU91
UUC135
Leu L17.3%
UUA84
UUG17
CUU144
CUC189
CUA171
CUG52
Ile I7.0%
AUU116
AUC150
Met M3.9%
AUA75
AUG74
Val V6.0%
GUU61
GUC76
GUA60
GUG30
Ser S6.6%
UCU42
UCC86
UCA55
UCG8
AGU15
AGC47
Pro P5.7%
CCU55
CCC117
CCA29
CCG16
Thr T7.9%
ACU51
ACC133
ACA104
ACG14
Ala A9.4%
GCU63
GCC191
GCA86
GCG18
Tyr Y2.9%
UAU34
UAC77
His H2.9%
CAU28
CAC82
Gln Q2.6%
CAA75
CAG24
Asn N2.9%
AAU43
AAC69
Lys K1.8%
AAA58
AAG12
Asp D1.9%
GAU25
GAC48
Glu E2.7%
GAA79
GAG22
Cys C0.7%
UGU9
UGC17
Trp W3.1%
UGA101
UGG17
Arg R2.0%
CGU12
CGC17
CGA34
CGG14
Gly G6.5%
GGU41
GGC82
GGA76
GGG49
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
37 annotated features in NC_082782.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,014 | 946 bp | + | 49.1% |
| tRNA-Val | Transfer RNA | 1,015 | 1,086 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,780 | 1,694 bp | + | 47.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,781 | 2,854 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,829 | 975 bp | + | 50.5% |
| tRNA-Ile | Transfer RNA | 3,834 | 3,903 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,903 | 3,973 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,973 | 4,041 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,042 | 5,087 | 1,046 bp | + | 49.3% |
| tRNA-Trp | Transfer RNA | 5,088 | 5,156 | 69 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,159 | 5,227 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,229 | 5,301 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,339 | 5,404 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,405 | 5,474 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,476 | 7,026 | 1,551 bp | + | 47.8% |
| tRNA-Ser (UCN) | Transfer RNA | 7,027 | 7,097 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,101 | 7,173 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,180 | 7,870 | 691 bp | + | 45.7% |
| tRNA-Lys | Transfer RNA | 7,871 | 7,944 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,946 | 8,113 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,104 | 8,787 | 684 bp | + | 50.4% |
| COX3 | Protein-coding gene | 8,787 | 9,571 | 785 bp | + | 48.8% |
| tRNA-Gly | Transfer RNA | 9,572 | 9,644 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,645 | 9,993 | 349 bp | + | 49.3% |
| tRNA-Arg | Transfer RNA | 9,994 | 10,062 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,063 | 10,359 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,353 | 11,733 | 1,381 bp | + | 48.5% |
| tRNA-His | Transfer RNA | 11,734 | 11,802 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,803 | 11,870 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,875 | 11,947 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,948 | 13,786 | 1,839 bp | + | 48.2% |
| ND6 | Protein-coding gene | 13,783 | 14,304 | 522 bp | − | 46.7% |
| tRNA-Glu | Transfer RNA | 14,305 | 14,373 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,378 | 15,518 | 1,141 bp | + | 48.6% |
| tRNA-Thr | Transfer RNA | 15,519 | 15,590 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,590 | 15,659 | 70 bp | − | – |