MitoAge

Homo sapiens

Human

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Maximum lifespan
122.5 yr
AnAge record
mtDNA size
16,569 bp
RefSeq NC_012920.1
GC content
44.36%
Whole genome
Non-coding
1,211 bp
D-loop 1,122 bp

Where Human sits among 2,335 species

Whole-genome GC content against maximum lifespan. Human has the 14th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Human
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,569 bp
GC skew (G − C) / (G + C)
−0.410
AT skew (A − T) / (A + T)
+0.112

Life history

Maximum lifespan
122.5 years
Adult weight
62 kg
Birth weight
3.3 kg
Basal metabolic rate
82.78 W
Body temperature
37 °C
Female sexual maturity
13 years
Male sexual maturity
14 years
Gestation or incubation
280 days
Litter or clutch size
1
Litters per year
0.3
Postnatal growth rate
0.0005 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02789)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, huge sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,569 bp
Protein-coding11,341 bp
12S rRNA954 bp
16S rRNA1,559 bp
All tRNA1,504 bp
D-loop1,122 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp28.5%23.8%11.7%36.0%47.70%−0.509+0.088
ND2NADH dehydrogenase subunit 21,042 bp31.3%25.7%9.5%33.5%42.99%−0.558+0.098
COX1Cytochrome c oxidase subunit I1,542 bp27.2%26.6%16.2%30.0%46.24%−0.299+0.011
COX2Cytochrome c oxidase subunit II684 bp28.7%25.1%14.9%31.3%46.20%−0.354+0.065
ATP8ATP synthase F0 subunit 8207 bp38.6%21.7%6.3%33.3%39.61%−0.683+0.280
ATP6ATP synthase F0 subunit 6681 bp30.2%25.6%10.4%33.8%44.20%−0.528+0.084
COX3Cytochrome c oxidase subunit III784 bp26.8%26.7%14.8%31.8%46.56%−0.364+0.002
ND3NADH dehydrogenase subunit 3346 bp29.5%30.3%10.7%29.5%40.17%−0.468−0.014
ND4LNADH dehydrogenase subunit 4L297 bp28.3%28.6%12.1%31.0%43.10%−0.438−0.006
ND4NADH dehydrogenase subunit 41,378 bp30.2%25.5%9.9%34.3%44.27%−0.551+0.083
ND5NADH dehydrogenase subunit 51,812 bp30.4%24.7%10.6%34.3%44.92%−0.528+0.104
ND6NADH dehydrogenase subunit 6525 bp37.7%19.6%7.0%35.6%42.67%−0.670+0.316
CYTBCytochrome b1,141 bp28.6%25.2%12.0%34.3%46.28%−0.481+0.064
12S rRNA12S ribosomal RNA954 bp33.0%21.5%19.0%26.5%45.49%−0.166+0.212
16S rRNA16S ribosomal RNA1,559 bp35.1%22.1%17.3%25.5%42.81%−0.190+0.228
D-loopControl region (D-loop)1,122 bp30.2%23.2%13.5%33.1%46.61%−0.419+0.132

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.7%
UUU77
UUC139
Leu L17.0%
UUA73
UUG18
CUU65
CUC167
CUA276
CUG45
Ile I8.4%
AUU124
AUC196
Met M5.5%
AUA167
AUG40
Val V4.4%
GUU31
GUC48
GUA70
GUG18
Ser S7.2%
UCU32
UCC99
UCA83
UCG7
AGU14
AGC39
Pro P5.8%
CCU41
CCC119
CCA52
CCG7
Thr T9.2%
ACU52
ACC155
ACA134
ACG10
Ala A6.7%
GCU43
GCC124
GCA80
GCG8
Tyr Y3.6%
UAU46
UAC89
His H2.6%
CAU18
CAC79
Gln Q2.4%
CAA82
CAG8
Asn N4.3%
AAU32
AAC132
Lys K2.5%
AAA85
AAG10
Asp D1.7%
GAU15
GAC51
Glu E2.3%
GAA64
GAG24
Cys C0.6%
UGU5
UGC17
Trp W2.7%
UGA93
UGG11
Arg R1.7%
CGU7
CGC26
CGA28
CGG2
Gly G5.6%
GGU24
GGC87
GGA67
GGG34
Stop 0.2%
UAA3
UAG2
AGA1
AGG1

Genome map

38 annotated features in NC_012920.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (44.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA57764771 bp+–
12S rRNARibosomal RNA6481,601954 bp+45.5%
tRNA-ValTransfer RNA1,6021,67069 bp+–
16S rRNARibosomal RNA1,6713,2291,559 bp+42.8%
tRNA-Leu (UUR)Transfer RNA3,2303,30475 bp+–
ND1Protein-coding gene3,3074,262956 bp+47.7%
tRNA-IleTransfer RNA4,2634,33169 bp+–
tRNA-GlnTransfer RNA4,3294,40072 bp−–
tRNA-MetTransfer RNA4,4024,46968 bp+–
ND2Protein-coding gene4,4705,5111,042 bp+43.0%
tRNA-TrpTransfer RNA5,5125,57968 bp+–
tRNA-AlaTransfer RNA5,5875,65569 bp−–
tRNA-AsnTransfer RNA5,6575,72973 bp−–
tRNA-CysTransfer RNA5,7615,82666 bp−–
tRNA-TyrTransfer RNA5,8265,89166 bp−–
COX1Protein-coding gene5,9047,4451,542 bp+46.2%
tRNA-Ser (UCN)Transfer RNA7,4467,51469 bp−–
tRNA-AspTransfer RNA7,5187,58568 bp+–
COX2Protein-coding gene7,5868,269684 bp+46.2%
tRNA-LysTransfer RNA8,2958,36470 bp+–
ATP8Protein-coding gene8,3668,572207 bp+39.6%
ATP6Protein-coding gene8,5279,207681 bp+44.2%
COX3Protein-coding gene9,2079,990784 bp+46.6%
tRNA-GlyTransfer RNA9,99110,05868 bp+–
ND3Protein-coding gene10,05910,404346 bp+40.2%
tRNA-ArgTransfer RNA10,40510,46965 bp+–
ND4LProtein-coding gene10,47010,766297 bp+43.1%
ND4Protein-coding gene10,76012,1371,378 bp+44.3%
tRNA-HisTransfer RNA12,13812,20669 bp+–
tRNA-Ser (AGY)Transfer RNA12,20712,26559 bp+–
tRNA-Leu (CUN)Transfer RNA12,26612,33671 bp+–
ND5Protein-coding gene12,33714,1481,812 bp+44.9%
ND6Protein-coding gene14,14914,673525 bp−42.7%
tRNA-GluTransfer RNA14,67414,74269 bp−–
CYTBProtein-coding gene14,74715,8871,141 bp+46.3%
tRNA-ThrTransfer RNA15,88815,95366 bp+–
tRNA-ProTransfer RNA15,95616,02368 bp−–
D-loopControl region16,0245761,122 bp–46.6%

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