Huso dauricus

Kaluga

Maximum lifespan

55 yr

AnAge record

mtDNA size

16,691 bp

RefSeq NC_023837.1

GC content

45.43%

Whole genome

Non-coding

1,061 bp

D-loop 978 bp

Where Kaluga sits among 2,335 species

Whole-genome GC content against maximum lifespan. Kaluga has the 117th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,691 bp

GC skew (G − C) / (G + C): −0.289
AT skew (A − T) / (A + T): +0.114

Life history

Maximum lifespan: 55 years
Adult weight: 550 kg
Female sexual maturity: 16.7 years
Male sexual maturity: 17.5 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01874)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,691 bp

Protein-coding11,412 bp

12S rRNA959 bp

16S rRNA1,701 bp

All tRNA1,558 bp

D-loop978 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Huso dauricus genes

ND1NADH dehydrogenase subunit 1	975 bp	28.3%	25.7%	14.4%	31.6%	45.95%	−0.375	+0.047
ND2NADH dehydrogenase subunit 2	1,045 bp	32.7%	22.4%	12.0%	32.9%	44.88%	−0.467	+0.188
COX1Cytochrome c oxidase subunit I	1,554 bp	24.7%	27.2%	19.4%	28.7%	48.07%	−0.194	−0.048
COX2Cytochrome c oxidase subunit II	691 bp	31.5%	24.7%	16.5%	27.2%	43.71%	−0.245	+0.121
ATP8ATP synthase F0 subunit 8	168 bp	33.3%	26.2%	11.3%	29.2%	40.48%	−0.441	+0.120
ATP6ATP synthase F0 subunit 6	684 bp	26.9%	25.6%	13.6%	33.9%	47.52%	−0.428	+0.025
COX3Cytochrome c oxidase subunit III	785 bp	27.3%	25.0%	16.6%	31.2%	47.77%	−0.307	+0.044
ND3NADH dehydrogenase subunit 3	349 bp	22.9%	28.4%	17.8%	30.9%	48.71%	−0.271	−0.106
ND4LNADH dehydrogenase subunit 4L	297 bp	24.2%	25.9%	14.8%	35.0%	49.83%	−0.405	−0.034
ND4NADH dehydrogenase subunit 4	1,381 bp	29.8%	24.8%	14.5%	31.0%	45.47%	−0.363	+0.092
ND5NADH dehydrogenase subunit 5	1,842 bp	31.0%	24.1%	12.8%	32.1%	44.90%	−0.429	+0.125
ND6NADH dehydrogenase subunit 6	522 bp	40.8%	11.3%	12.5%	35.4%	47.89%	−0.480	+0.566
CYTBCytochrome b	1,141 bp	27.0%	26.0%	15.2%	31.7%	46.98%	−0.351	+0.018
12S rRNA12S ribosomal RNA	959 bp	31.9%	18.9%	21.7%	27.5%	49.22%	−0.119	+0.257
16S rRNA16S ribosomal RNA	1,701 bp	36.2%	19.6%	19.6%	24.7%	44.27%	−0.116	+0.297
D-loopControl region (D-loop)	978 bp	33.5%	31.6%	13.0%	21.9%	34.87%	−0.255	+0.030

Codon usage

Counts per codon, darker is more frequent

Gene

3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%

UUU95

UUC126

Leu L16.5%

UUA87

UUG24

CUU79

CUC131

CUA251

CUG57

Ile I7.4%

AUU134

AUC147

Met M4.6%

AUA119

AUG55

Val V5.9%

GUU41

GUC51

GUA90

GUG41

Ser S6.2%

UCU35

UCC76

UCA61

UCG11

AGU10

AGC43

Pro P5.6%

CCU28

CCC91

CCA84

CCG11

Thr T8.4%

ACU37

ACC142

ACA127

ACG14

Ala A8.7%

GCU36

GCC171

GCA111

GCG13

Tyr Y3.1%

UAU41

UAC76

His H2.7%

CAU20

CAC82

Gln Q2.7%

CAA90

CAG14

Asn N3.4%

AAU31

AAC99

Lys K2.0%

AAA71

AAG7

Asp D1.9%

GAU16

GAC58

Glu E2.7%

GAA85

GAG17

Cys C0.8%

UGU12

UGC17

Trp W3.2%

UGA100

UGG20

Arg R2.0%

CGU6

CGC12

CGA51

CGG6

Gly G6.4%

GGU23

GGC87

GGA92

GGG40

Stop 0.2%

UAA5

UAG2

AGA0

AGG0

Genome map

38 annotated features in NC_023837.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (45.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Huso dauricus (NC_023837.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,027	959 bp	+	49.2%
tRNA-Val	Transfer RNA	1,028	1,098	71 bp	+	–
16S rRNA	Ribosomal RNA	1,099	2,799	1,701 bp	+	44.3%
tRNA-Leu (UUR)	Transfer RNA	2,800	2,874	75 bp	+	–
ND1	Protein-coding gene	2,875	3,849	975 bp	+	46.0%
tRNA-Ile	Transfer RNA	3,859	3,929	71 bp	+	–
tRNA-Gln	Transfer RNA	3,929	3,999	71 bp	−	–
tRNA-Met	Transfer RNA	3,999	4,068	70 bp	+	–
ND2	Protein-coding gene	4,069	5,113	1,045 bp	+	44.9%
tRNA-Trp	Transfer RNA	5,114	5,186	73 bp	+	–
tRNA-Ala	Transfer RNA	5,188	5,256	69 bp	−	–
tRNA-Asn	Transfer RNA	5,258	5,330	73 bp	−	–
tRNA-Cys	Transfer RNA	5,364	5,430	67 bp	−	–
tRNA-Tyr	Transfer RNA	5,431	5,501	71 bp	−	–
COX1	Protein-coding gene	5,503	7,056	1,554 bp	+	48.1%
tRNA-Ser (UCN)	Transfer RNA	7,065	7,133	69 bp	−	–
tRNA-Asp	Transfer RNA	7,143	7,214	72 bp	+	–
COX2	Protein-coding gene	7,229	7,919	691 bp	+	43.7%
tRNA-Lys	Transfer RNA	7,920	7,993	74 bp	+	–
ATP8	Protein-coding gene	7,996	8,163	168 bp	+	40.5%
ATP6	Protein-coding gene	8,154	8,837	684 bp	+	47.5%
COX3	Protein-coding gene	8,837	9,621	785 bp	+	47.8%
tRNA-Gly	Transfer RNA	9,622	9,694	73 bp	+	–
ND3	Protein-coding gene	9,695	10,043	349 bp	+	48.7%
tRNA-Arg	Transfer RNA	10,044	10,113	70 bp	+	–
ND4L	Protein-coding gene	10,114	10,410	297 bp	+	49.8%
ND4	Protein-coding gene	10,404	11,784	1,381 bp	+	45.5%
tRNA-His	Transfer RNA	11,785	11,853	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,854	11,921	68 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,922	11,994	73 bp	+	–
ND5	Protein-coding gene	11,995	13,836	1,842 bp	+	44.9%
ND6	Protein-coding gene	13,833	14,354	522 bp	−	47.9%
tRNA-Glu	Transfer RNA	14,355	14,424	70 bp	−	–
CYTB	Protein-coding gene	14,427	15,567	1,141 bp	+	47.0%
tRNA-Thr	Transfer RNA	15,568	15,640	73 bp	+	–
tRNA-Pro	Transfer RNA	15,644	15,713	70 bp	−	–
D-loop	Control region	15,714	16,691	978 bp	–	34.9%