Hylobates agilis
Agile gibbon
GC content
45.69%
Whole genome
Non-coding
1,134 bp
D-loop 1,050 bp
Where Agile gibbon sits among 2,335 species
Whole-genome GC content against maximum lifespan. Agile gibbon has the 156th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,500 bp
- GC skew (G − C) / (G + C)
- −0.394
- AT skew (A − T) / (A + T)
- +0.119
Life history
- Maximum lifespan
- 49 years
- Adult weight
- 5.9 kg
- Female sexual maturity
- 7.8 years
- Male sexual maturity
- 5 years
- Gestation or incubation
- 216 days
- Litter or clutch size
- 1
- Litters per year
- 0.3
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02794)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,500 bp
Protein-coding11,342 bp
12S rRNA951 bp
16S rRNA1,560 bp
All tRNA1,513 bp
D-loop1,050 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 956 bp | 46.76% | −0.490 | +0.081 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,043 bp | 44.68% | −0.562 | +0.158 | |||||
| COX1Cytochrome c oxidase subunit I | 1,542 bp | 47.47% | −0.276 | −0.037 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 45.91% | −0.350 | +0.081 | |||||
| ATP8ATP synthase F0 subunit 8 | 207 bp | 45.41% | −0.660 | +0.292 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 45.96% | −0.514 | +0.109 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 48.60% | −0.354 | −0.002 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 43.06% | −0.463 | +0.107 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 45.79% | −0.485 | +0.043 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 44.92% | −0.515 | +0.059 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,812 bp | 46.14% | −0.524 | +0.133 | |||||
| ND6NADH dehydrogenase subunit 6 | 525 bp | 46.48% | −0.615 | +0.367 | |||||
| CYTBCytochrome b | 1,141 bp | 47.50% | −0.406 | +0.058 | |||||
| 12S rRNA12S ribosomal RNA | 951 bp | 46.90% | −0.179 | +0.232 | |||||
| 16S rRNA16S ribosomal RNA | 1,560 bp | 43.40% | −0.188 | +0.243 | |||||
| D-loopControl region (D-loop) | 1,050 bp | 48.19% | −0.415 | +0.092 |
Codon usage
Counts per codon, darker is more frequent3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.4%
UUU72
UUC132
Leu L17.1%
UUA54
UUG27
CUU63
CUC166
CUA276
CUG65
Ile I8.1%
AUU121
AUC188
Met M5.3%
AUA156
AUG46
Val V4.7%
GUU29
GUC58
GUA68
GUG22
Ser S7.0%
UCU31
UCC101
UCA71
UCG12
AGU6
AGC44
Pro P5.7%
CCU30
CCC113
CCA69
CCG6
Thr T9.4%
ACU44
ACC159
ACA132
ACG22
Ala A7.0%
GCU39
GCC141
GCA74
GCG11
Tyr Y3.5%
UAU45
UAC87
His H2.7%
CAU23
CAC81
Gln Q2.4%
CAA79
CAG13
Asn N4.5%
AAU33
AAC136
Lys K2.4%
AAA86
AAG7
Asp D1.6%
GAU16
GAC44
Glu E2.4%
GAA70
GAG21
Cys C0.6%
UGU6
UGC15
Trp W2.7%
UGA75
UGG28
Arg R1.7%
CGU3
CGC29
CGA29
CGG4
Gly G5.6%
GGU21
GGC95
GGA58
GGG37
Stop 0.2%
UAA3
UAG2
AGA1
AGG1
Genome map
38 annotated features in NC_014042.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,021 | 951 bp | + | 46.9% |
| tRNA-Val | Transfer RNA | 1,022 | 1,089 | 68 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,090 | 2,649 | 1,560 bp | + | 43.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,650 | 2,724 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,727 | 3,682 | 956 bp | + | 46.8% |
| tRNA-Ile | Transfer RNA | 3,683 | 3,751 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,749 | 3,820 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 3,821 | 3,888 | 68 bp | + | – |
| ND2 | Protein-coding gene | 3,889 | 4,931 | 1,043 bp | + | 44.7% |
| tRNA-Trp | Transfer RNA | 4,932 | 5,009 | 78 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,009 | 5,076 | 68 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,078 | 5,151 | 74 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,184 | 5,249 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,249 | 5,314 | 66 bp | − | – |
| COX1 | Protein-coding gene | 5,327 | 6,868 | 1,542 bp | + | 47.5% |
| tRNA-Ser (UCN) | Transfer RNA | 6,869 | 6,937 | 69 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,941 | 7,009 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,010 | 7,693 | 684 bp | + | 45.9% |
| tRNA-Lys | Transfer RNA | 7,721 | 7,790 | 70 bp | + | – |
| ATP8 | Protein-coding gene | 7,792 | 7,998 | 207 bp | + | 45.4% |
| ATP6 | Protein-coding gene | 7,953 | 8,633 | 681 bp | + | 46.0% |
| COX3 | Protein-coding gene | 8,633 | 9,416 | 784 bp | + | 48.6% |
| tRNA-Gly | Transfer RNA | 9,417 | 9,484 | 68 bp | + | – |
| ND3 | Protein-coding gene | 9,485 | 9,830 | 346 bp | + | 43.1% |
| tRNA-Arg | Transfer RNA | 9,831 | 9,896 | 66 bp | + | – |
| ND4L | Protein-coding gene | 9,897 | 10,193 | 297 bp | + | 45.8% |
| ND4 | Protein-coding gene | 10,187 | 11,564 | 1,378 bp | + | 44.9% |
| tRNA-His | Transfer RNA | 11,565 | 11,633 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,634 | 11,692 | 59 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,693 | 11,763 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,764 | 13,575 | 1,812 bp | + | 46.1% |
| ND6 | Protein-coding gene | 13,576 | 14,100 | 525 bp | − | 46.5% |
| tRNA-Glu | Transfer RNA | 14,101 | 14,169 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,174 | 15,314 | 1,141 bp | + | 47.5% |
| tRNA-Thr | Transfer RNA | 15,315 | 15,380 | 66 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,383 | 15,450 | 68 bp | − | – |
| D-loop | Control region | 15,451 | 16,500 | 1,050 bp | – | 48.2% |