Labeo boggut
Boggut labeo
GC content
42.50%
Whole genome
Non-coding
1,007 bp
D-loop 937 bp
Where Boggut labeo sits among 2,335 species
Whole-genome GC content against maximum lifespan. Boggut labeo has the 2,232nd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,603 bp
- GC skew (G − C) / (G + C)
- −0.272
- AT skew (A − T) / (A + T)
- +0.128
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,603 bp
Protein-coding11,392 bp
12S rRNA956 bp
16S rRNA1,688 bp
All tRNA1,560 bp
D-loop937 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 43.69% | −0.371 | +0.133 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 43.45% | −0.449 | +0.235 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.78% | −0.184 | −0.050 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 41.68% | −0.257 | +0.097 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 38.18% | −0.397 | +0.137 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 41.00% | −0.357 | +0.057 | |||||
| COX3Cytochrome c oxidase subunit III | 786 bp | 44.40% | −0.278 | +0.053 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 42.41% | −0.365 | −0.025 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 45.12% | −0.313 | −0.006 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 41.64% | −0.363 | +0.132 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,824 bp | 40.24% | −0.414 | +0.134 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 43.30% | −0.460 | +0.527 | |||||
| CYTBCytochrome b | 1,141 bp | 41.81% | −0.338 | +0.045 | |||||
| 12S rRNA12S ribosomal RNA | 956 bp | 48.54% | −0.103 | +0.248 | |||||
| 16S rRNA16S ribosomal RNA | 1,688 bp | 43.07% | −0.100 | +0.303 | |||||
| D-loopControl region (D-loop) | 937 bp | 33.19% | −0.190 | +0.016 |
Codon usage
Counts per codon, darker is more frequent3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU71
UUC157
Leu L16.4%
UUA111
UUG16
CUU75
CUC87
CUA306
CUG29
Ile I7.7%
AUU181
AUC113
Met M4.5%
AUA130
AUG41
Val V5.9%
GUU55
GUC40
GUA118
GUG13
Ser S6.1%
UCU31
UCC54
UCA93
UCG5
AGU7
AGC42
Pro P5.6%
CCU28
CCC36
CCA139
CCG9
Thr T8.1%
ACU53
ACC94
ACA155
ACG4
Ala A8.8%
GCU50
GCC137
GCA140
GCG8
Tyr Y3.0%
UAU52
UAC63
His H2.8%
CAU31
CAC75
Gln Q2.6%
CAA95
CAG4
Asn N3.2%
AAU39
AAC83
Lys K2.0%
AAA75
AAG1
Asp D2.0%
GAU17
GAC59
Glu E2.7%
GAA89
GAG14
Cys C0.7%
UGU8
UGC17
Trp W3.2%
UGA111
UGG9
Arg R2.0%
CGU11
CGC13
CGA49
CGG3
Gly G6.5%
GGU32
GGC45
GGA143
GGG28
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_029450.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,025 | 956 bp | + | 48.5% |
| tRNA-Val | Transfer RNA | 1,026 | 1,097 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,098 | 2,785 | 1,688 bp | + | 43.1% |
| tRNA-Leu (UUR) | Transfer RNA | 2,786 | 2,861 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,863 | 3,837 | 975 bp | + | 43.7% |
| tRNA-Ile | Transfer RNA | 3,842 | 3,913 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,912 | 3,982 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,984 | 4,052 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,053 | 5,097 | 1,045 bp | + | 43.5% |
| tRNA-Trp | Transfer RNA | 5,098 | 5,168 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,171 | 5,239 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,241 | 5,313 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,347 | 5,413 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,415 | 5,485 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,487 | 7,037 | 1,551 bp | + | 43.8% |
| tRNA-Ser (UCN) | Transfer RNA | 7,038 | 7,108 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,112 | 7,183 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,197 | 7,887 | 691 bp | + | 41.7% |
| tRNA-Lys | Transfer RNA | 7,888 | 7,963 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,965 | 8,129 | 165 bp | + | 38.2% |
| ATP6 | Protein-coding gene | 8,123 | 8,805 | 683 bp | + | 41.0% |
| COX3 | Protein-coding gene | 8,806 | 9,591 | 786 bp | + | 44.4% |
| tRNA-Gly | Transfer RNA | 9,592 | 9,663 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,664 | 10,012 | 349 bp | + | 42.4% |
| tRNA-Arg | Transfer RNA | 10,013 | 10,082 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,083 | 10,379 | 297 bp | + | 45.1% |
| ND4 | Protein-coding gene | 10,373 | 11,753 | 1,381 bp | + | 41.6% |
| tRNA-His | Transfer RNA | 11,754 | 11,822 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,823 | 11,891 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,893 | 11,965 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,969 | 13,792 | 1,824 bp | + | 40.2% |
| ND6 | Protein-coding gene | 13,789 | 14,310 | 522 bp | − | 43.3% |
| tRNA-Glu | Transfer RNA | 14,311 | 14,379 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,385 | 15,525 | 1,141 bp | + | 41.8% |
| tRNA-Thr | Transfer RNA | 15,526 | 15,597 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,597 | 15,666 | 70 bp | − | – |
| D-loop | Control region | 15,667 | 16,603 | 937 bp | – | 33.2% |