Lacerta viridis

European green lizard

Maximum lifespan

10 yr

AnAge record

mtDNA size

17,156 bp

RefSeq NC_008328.1

GC content

40.23%

Whole genome

Non-coding

1,837 bp

D-loop 1,752 bp

Where European green lizard sits among 2,335 species

Whole-genome GC content against maximum lifespan. European green lizard has the 1,567th longest lifespan of them.

This species
Other reptiles
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,156 bp

GC skew (G − C) / (G + C): −0.341
AT skew (A − T) / (A + T): +0.048

Life history

Maximum lifespan: 10 years
Adult weight: 21.5 g
Basal metabolic rate: 0.003 W
Body temperature: 20.7 °C

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03515)

About this record

Lifespan source: AnAge build 15
Based on: an observed animal, origin not stated
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome17,156 bp

Protein-coding11,345 bp

12S rRNA943 bp

16S rRNA1,532 bp

All tRNA1,506 bp

D-loop1,752 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Lacerta viridis genes

ND1NADH dehydrogenase subunit 1	969 bp	30.9%	29.6%	12.0%	27.6%	39.53%	−0.394	+0.020
ND2NADH dehydrogenase subunit 2	1,035 bp	33.0%	28.0%	9.1%	29.9%	38.94%	−0.534	+0.082
COX1Cytochrome c oxidase subunit I	1,545 bp	26.3%	31.6%	16.7%	25.4%	42.14%	−0.207	−0.092
COX2Cytochrome c oxidase subunit II	685 bp	32.4%	27.7%	14.3%	25.5%	39.85%	−0.282	+0.078
ATP8ATP synthase F0 subunit 8	154 bp	35.7%	29.2%	5.8%	29.2%	35.07%	−0.667	+0.100
ATP6ATP synthase F0 subunit 6	681 bp	30.8%	29.5%	10.4%	29.2%	39.65%	−0.474	+0.022
COX3Cytochrome c oxidase subunit III	784 bp	29.6%	28.3%	15.6%	26.5%	42.09%	−0.261	+0.022
ND3NADH dehydrogenase subunit 3	346 bp	27.7%	30.6%	12.1%	29.5%	41.62%	−0.417	−0.050
ND4LNADH dehydrogenase subunit 4L	292 bp	31.2%	30.8%	10.3%	27.7%	38.01%	−0.459	+0.006
ND4NADH dehydrogenase subunit 4	1,381 bp	29.5%	29.7%	9.5%	31.3%	40.77%	−0.535	−0.002
ND5NADH dehydrogenase subunit 5	1,824 bp	31.4%	27.4%	12.1%	29.1%	41.23%	−0.412	+0.067
ND6NADH dehydrogenase subunit 6	516 bp	45.9%	14.5%	8.3%	31.2%	39.54%	−0.578	+0.519
CYTBCytochrome b	1,143 bp	27.5%	31.6%	11.9%	29.0%	40.95%	−0.419	−0.070
12S rRNA12S ribosomal RNA	943 bp	33.9%	23.9%	18.8%	23.4%	42.21%	−0.111	+0.174
16S rRNA16S ribosomal RNA	1,532 bp	34.1%	23.8%	17.4%	24.8%	42.17%	−0.176	+0.178
D-loopControl region (D-loop)	1,752 bp	30.3%	35.8%	11.2%	22.7%	33.90%	−0.340	−0.085

Codon usage

Counts per codon, darker is more frequent

Gene

3,783 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%

UUU133

UUC91

Leu L17.4%

UUA156

UUG27

CUU133

CUC99

CUA221

CUG22

Ile I8.3%

AUU198

AUC117

Met M5.4%

AUA173

AUG32

Val V4.3%

GUU63

GUC38

GUA51

GUG12

Ser S6.4%

UCU43

UCC54

UCA88

UCG8

AGU14

AGC35

Pro P5.7%

CCU41

CCC63

CCA106

CCG5

Thr T9.8%

ACU79

ACC137

ACA149

ACG5

Ala A7.0%

GCU56

GCC118

GCA87

GCG4

Tyr Y3.0%

UAU54

UAC59

His H2.9%

CAU39

CAC70

Gln Q2.4%

CAA79

CAG13

Asn N3.6%

AAU50

AAC85

Lys K2.3%

AAA73

AAG14

Asp D1.8%

GAU33

GAC35

Glu E2.4%

GAA75

GAG15

Cys C0.7%

UGU14

UGC14

Trp W2.7%

UGA93

UGG10

Arg R1.9%

CGU11

CGC22

CGA35

CGG5

Gly G5.8%

GGU45

GGC73

GGA70

GGG32

Stop 0.2%

UAA4

UAG1

AGA0

AGG2

Genome map

38 annotated features in NC_008328.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (40.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Lacerta viridis (NC_008328.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	73	73 bp	+	–
12S rRNA	Ribosomal RNA	74	1,016	943 bp	+	42.2%
tRNA-Val	Transfer RNA	1,017	1,081	65 bp	+	–
16S rRNA	Ribosomal RNA	1,082	2,613	1,532 bp	+	42.2%
tRNA-Leu (UUR)	Transfer RNA	2,614	2,686	73 bp	+	–
ND1	Protein-coding gene	2,687	3,655	969 bp	+	39.5%
tRNA-Ile	Transfer RNA	3,665	3,734	70 bp	+	–
tRNA-Gln	Transfer RNA	3,735	3,805	71 bp	−	–
tRNA-Met	Transfer RNA	3,804	3,871	68 bp	−	–
ND2	Protein-coding gene	3,873	4,907	1,035 bp	+	38.9%
tRNA-Trp	Transfer RNA	4,906	4,974	69 bp	+	–
tRNA-Ala	Transfer RNA	4,976	5,044	69 bp	−	–
tRNA-Asn	Transfer RNA	5,046	5,118	73 bp	−	–
tRNA-Cys	Transfer RNA	5,151	5,213	63 bp	+	–
tRNA-Tyr	Transfer RNA	5,218	5,285	68 bp	−	–
COX1	Protein-coding gene	5,287	6,831	1,545 bp	+	42.1%
tRNA-Ser (UCN)	Transfer RNA	6,827	6,896	70 bp	+	–
tRNA-Asp	Transfer RNA	6,900	6,969	70 bp	+	–
COX2	Protein-coding gene	6,970	7,654	685 bp	+	39.9%
tRNA-Lys	Transfer RNA	7,655	7,719	65 bp	+	–
ATP8	Protein-coding gene	7,721	7,874	154 bp	+	35.1%
ATP6	Protein-coding gene	7,873	8,553	681 bp	+	39.7%
COX3	Protein-coding gene	8,553	9,336	784 bp	+	42.1%
tRNA-Gly	Transfer RNA	9,337	9,405	69 bp	+	–
ND3	Protein-coding gene	9,406	9,751	346 bp	+	41.6%
tRNA-Arg	Transfer RNA	9,752	9,817	66 bp	+	–
ND4L	Protein-coding gene	9,819	10,110	292 bp	+	38.0%
ND4	Protein-coding gene	10,109	11,489	1,381 bp	+	40.8%
tRNA-His	Transfer RNA	11,490	11,556	67 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,557	11,620	64 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,622	11,692	71 bp	+	–
ND5	Protein-coding gene	11,696	13,519	1,824 bp	+	41.2%
ND6	Protein-coding gene	13,515	14,030	516 bp	−	39.5%
tRNA-Glu	Transfer RNA	14,031	14,098	68 bp	−	–
CYTB	Protein-coding gene	14,106	15,248	1,143 bp	+	41.0%
tRNA-Thr	Transfer RNA	15,252	15,318	67 bp	+	–
tRNA-Pro	Transfer RNA	15,336	15,404	69 bp	−	–
D-loop	Control region	15,405	17,156	1,752 bp	–	33.9%