Lagocephalus sceleratus
Silver-cheeked toadfish
GC content
48.57%
Whole genome
Non-coding
872 bp
D-loop 811 bp
Where Silver-cheeked toadfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Silver-cheeked toadfish has the 1,848th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,442 bp
- GC skew (G − C) / (G + C)
- −0.294
- AT skew (A − T) / (A + T)
- +0.073
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- questionable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,442 bp
Protein-coding11,414 bp
12S rRNA948 bp
16S rRNA1,673 bp
All tRNA1,544 bp
D-loop811 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 50.15% | −0.350 | 0.000 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 49.81% | −0.447 | +0.131 | |||||
| COX1Cytochrome c oxidase subunit I | 1,560 bp | 51.09% | −0.227 | −0.062 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.89% | −0.315 | +0.052 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 47.02% | −0.620 | +0.124 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 51.68% | −0.399 | −0.012 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.79% | −0.279 | −0.020 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 52.72% | −0.402 | −0.188 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.19% | −0.419 | −0.155 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 50.11% | −0.376 | −0.001 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 51.22% | −0.406 | +0.057 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.94% | −0.502 | +0.495 | |||||
| CYTBCytochrome b | 1,140 bp | 49.91% | −0.350 | −0.040 | |||||
| 12S rRNA12S ribosomal RNA | 948 bp | 50.11% | −0.082 | +0.226 | |||||
| 16S rRNA16S ribosomal RNA | 1,673 bp | 45.55% | −0.094 | +0.251 | |||||
| D-loopControl region (D-loop) | 811 bp | 34.65% | −0.189 | +0.026 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU69
UUC160
Leu L17.5%
UUA55
UUG34
CUU115
CUC190
CUA198
CUG76
Ile I6.5%
AUU97
AUC152
Met M4.3%
AUA92
AUG72
Val V6.0%
GUU52
GUC72
GUA63
GUG40
Ser S6.5%
UCU35
UCC99
UCA47
UCG11
AGU4
AGC53
Pro P5.9%
CCU42
CCC100
CCA68
CCG16
Thr T7.9%
ACU21
ACC157
ACA113
ACG11
Ala A9.3%
GCU49
GCC197
GCA93
GCG15
Tyr Y2.9%
UAU36
UAC74
His H2.9%
CAU22
CAC90
Gln Q2.4%
CAA74
CAG18
Asn N2.9%
AAU18
AAC92
Lys K2.0%
AAA64
AAG11
Asp D2.1%
GAU16
GAC65
Glu E2.5%
GAA62
GAG35
Cys C0.7%
UGU9
UGC16
Trp W3.1%
UGA93
UGG24
Arg R2.0%
CGU4
CGC16
CGA45
CGG12
Gly G6.2%
GGU14
GGC94
GGA74
GGG56
Stop 0.2%
UAA5
UAG0
AGA0
AGG2
Genome map
38 annotated features in NC_015340.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (48.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,016 | 948 bp | + | 50.1% |
| tRNA-Val | Transfer RNA | 1,017 | 1,088 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,089 | 2,761 | 1,673 bp | + | 45.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,762 | 2,835 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,836 | 3,810 | 975 bp | + | 50.2% |
| tRNA-Ile | Transfer RNA | 3,813 | 3,882 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,882 | 3,952 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,952 | 4,019 | 68 bp | + | – |
| ND2 | Protein-coding gene | 4,020 | 5,065 | 1,046 bp | + | 49.8% |
| tRNA-Trp | Transfer RNA | 5,066 | 5,135 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,137 | 5,205 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,208 | 5,280 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,315 | 5,378 | 64 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,379 | 5,448 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,450 | 7,009 | 1,560 bp | + | 51.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,001 | 7,071 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,075 | 7,146 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,153 | 7,843 | 691 bp | + | 46.9% |
| tRNA-Lys | Transfer RNA | 7,844 | 7,917 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,919 | 8,086 | 168 bp | + | 47.0% |
| ATP6 | Protein-coding gene | 8,077 | 8,759 | 683 bp | + | 51.7% |
| COX3 | Protein-coding gene | 8,760 | 9,544 | 785 bp | + | 48.8% |
| tRNA-Gly | Transfer RNA | 9,545 | 9,615 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,616 | 9,964 | 349 bp | + | 52.7% |
| tRNA-Arg | Transfer RNA | 9,965 | 10,033 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,035 | 10,331 | 297 bp | + | 52.2% |
| ND4 | Protein-coding gene | 10,325 | 11,705 | 1,381 bp | + | 50.1% |
| tRNA-His | Transfer RNA | 11,706 | 11,774 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,775 | 11,841 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,849 | 11,921 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,922 | 13,760 | 1,839 bp | + | 51.2% |
| ND6 | Protein-coding gene | 13,756 | 14,277 | 522 bp | − | 46.9% |
| tRNA-Glu | Transfer RNA | 14,278 | 14,346 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,350 | 15,489 | 1,140 bp | + | 49.9% |
| tRNA-Thr | Transfer RNA | 15,490 | 15,561 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,561 | 15,631 | 71 bp | − | – |
| D-loop | Control region | 15,632 | 16,442 | 811 bp | – | 34.7% |