MitoAge

Lemniscomys barbarus

Barbary striped grass mouse

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Maximum lifespan
4.4 yr
AnAge record
mtDNA size
16,274 bp
RefSeq NC_053800.1
GC content
35.31%
Whole genome
Non-coding
931 bp
D-loop 857 bp

Where Barbary striped grass mouse sits among 2,335 species

Whole-genome GC content against maximum lifespan. Barbary striped grass mouse has the 2,068th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Barbary striped grass mouse
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,274 bp
GC skew (G − C) / (G + C)
−0.290
AT skew (A − T) / (A + T)
+0.059

Life history

Maximum lifespan
4.4 years
Adult weight
26.2 g
Litter or clutch size
4.6

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 03041)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,274 bp
Protein-coding11,332 bp
12S rRNA951 bp
16S rRNA1,570 bp
All tRNA1,494 bp
D-loop857 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp32.6%30.5%11.1%25.9%36.96%−0.399+0.033
ND2NADH dehydrogenase subunit 21,036 bp37.5%30.4%7.5%24.5%32.05%−0.530+0.105
COX1Cytochrome c oxidase subunit I1,545 bp28.9%32.8%16.4%21.9%38.25%−0.144−0.063
COX2Cytochrome c oxidase subunit II684 bp33.5%31.6%13.9%21.1%34.94%−0.205+0.029
ATP8ATP synthase F0 subunit 8204 bp38.7%29.9%4.9%26.5%31.37%−0.688+0.129
ATP6ATP synthase F0 subunit 6681 bp32.7%33.8%10.0%23.5%33.48%−0.404−0.015
COX3Cytochrome c oxidase subunit III785 bp30.4%31.5%14.3%23.8%38.09%−0.251−0.016
ND3NADH dehydrogenase subunit 3348 bp35.3%31.0%9.5%24.1%33.62%−0.436+0.065
ND4LNADH dehydrogenase subunit 4L297 bp31.3%34.7%11.8%22.2%34.01%−0.307−0.051
ND4NADH dehydrogenase subunit 41,378 bp34.3%30.5%10.0%25.2%35.20%−0.431+0.059
ND5NADH dehydrogenase subunit 51,821 bp34.5%31.9%9.7%24.0%33.66%−0.426+0.040
ND6NADH dehydrogenase subunit 6519 bp41.6%24.9%7.3%26.2%33.53%−0.563+0.252
CYTBCytochrome b1,144 bp30.6%32.1%12.4%24.9%37.33%−0.335−0.024
12S rRNA12S ribosomal RNA951 bp37.3%26.2%17.1%19.3%36.49%−0.061+0.176
16S rRNA16S ribosomal RNA1,570 bp39.0%26.6%16.6%17.8%34.40%−0.037+0.188
D-loopControl region (D-loop)857 bp31.6%31.7%11.7%25.0%36.64%−0.363−0.002

Codon usage

Counts per codon, darker is more frequent

3,797 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU129
UUC108
Leu L15.2%
UUA167
UUG19
CUU99
CUC46
CUA234
CUG14
Ile I10.1%
AUU252
AUC130
Met M6.6%
AUA219
AUG32
Val V4.2%
GUU41
GUC22
GUA85
GUG11
Ser S7.7%
UCU54
UCC53
UCA126
UCG5
AGU23
AGC30
Pro P5.2%
CCU43
CCC35
CCA112
CCG6
Thr T8.2%
ACU78
ACC68
ACA162
ACG4
Ala A6.1%
GCU74
GCC70
GCA84
GCG5
Tyr Y3.5%
UAU76
UAC55
His H2.5%
CAU49
CAC45
Gln Q2.2%
CAA80
CAG3
Asn N4.5%
AAU88
AAC81
Lys K2.7%
AAA96
AAG5
Asp D1.9%
GAU44
GAC28
Glu E2.5%
GAA86
GAG10
Cys C0.7%
UGU13
UGC14
Trp W2.7%
UGA96
UGG8
Arg R1.7%
CGU12
CGC8
CGA42
CGG3
Gly G5.5%
GGU42
GGC38
GGA93
GGG34
Stop 0.2%
UAA8
UAG0
AGA0
AGG0

Genome map

38 annotated features in NC_053800.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (35.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16767 bp+–
12S rRNARibosomal RNA681,018951 bp+36.5%
tRNA-ValTransfer RNA1,0191,08668 bp+–
16S rRNARibosomal RNA1,0872,6561,570 bp+34.4%
tRNA-Leu (UUR)Transfer RNA2,6572,73175 bp+–
ND1Protein-coding gene2,7323,686955 bp+37.0%
tRNA-IleTransfer RNA3,6873,75569 bp+–
tRNA-GlnTransfer RNA3,7533,82371 bp−–
tRNA-MetTransfer RNA3,8293,89769 bp+–
ND2Protein-coding gene3,8984,9331,036 bp+32.1%
tRNA-TrpTransfer RNA4,9345,00067 bp+–
tRNA-AlaTransfer RNA5,0015,06969 bp−–
tRNA-AsnTransfer RNA5,0725,14271 bp−–
tRNA-CysTransfer RNA5,1745,24168 bp−–
tRNA-TyrTransfer RNA5,2425,30867 bp−–
COX1Protein-coding gene5,3106,8541,545 bp+38.3%
tRNA-Ser (UCN)Transfer RNA6,8526,92069 bp−–
tRNA-AspTransfer RNA6,9246,99168 bp+–
COX2Protein-coding gene6,9937,676684 bp+34.9%
tRNA-LysTransfer RNA7,6807,74364 bp+–
ATP8Protein-coding gene7,7457,948204 bp+31.4%
ATP6Protein-coding gene7,9068,586681 bp+33.5%
COX3Protein-coding gene8,5869,370785 bp+38.1%
tRNA-GlyTransfer RNA9,3709,43768 bp+–
ND3Protein-coding gene9,4389,785348 bp+33.6%
tRNA-ArgTransfer RNA9,7879,85468 bp+–
ND4LProtein-coding gene9,85610,152297 bp+34.0%
ND4Protein-coding gene10,14611,5231,378 bp+35.2%
tRNA-HisTransfer RNA11,52411,59168 bp+–
tRNA-Ser (AGY)Transfer RNA11,59211,64958 bp+–
tRNA-Leu (CUN)Transfer RNA11,65011,72071 bp+–
ND5Protein-coding gene11,72113,5411,821 bp+33.7%
ND6Protein-coding gene13,52814,046519 bp−33.5%
tRNA-GluTransfer RNA14,04714,11569 bp−–
CYTBProtein-coding gene14,11915,2621,144 bp+37.3%
tRNA-ThrTransfer RNA15,26315,32866 bp+–
tRNA-ProTransfer RNA15,33015,39667 bp−–
D-loopControl region15,39916,255857 bp–36.6%

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