MitoAge

Leontocebus nigricollis

Black-mantled tamarin

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Maximum lifespan
20.2 yr
AnAge record
mtDNA size
16,569 bp
RefSeq NC_064171.1
GC content
40.91%
Whole genome
Non-coding
1,213 bp
D-loop 1,138 bp

Where Black-mantled tamarin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Black-mantled tamarin has the 887th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Black-mantled tamarin
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,569 bp
GC skew (G − C) / (G + C)
−0.338
AT skew (A − T) / (A + T)
+0.102

Life history

Maximum lifespan
20.2 years
Adult weight
519.2 g
Birth weight
43.5 g
Female sexual maturity
2.3 years
Gestation or incubation
140 days
Litter or clutch size
1.8
Litters per year
2.9
Postnatal growth rate
0.0079 per day

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02688)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, tiny sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,569 bp
Protein-coding11,355 bp
12S rRNA955 bp
16S rRNA1,553 bp
All tRNA1,505 bp
D-loop1,138 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp31.1%25.4%11.5%31.9%43.46%−0.470+0.100
ND2NADH dehydrogenase subunit 21,039 bp35.2%26.8%8.3%29.7%38.02%−0.565+0.137
COX1Cytochrome c oxidase subunit I1,557 bp27.6%29.1%16.6%26.7%43.35%−0.233−0.027
COX2Cytochrome c oxidase subunit II688 bp31.4%28.5%13.8%26.3%40.12%−0.312+0.049
ATP8ATP synthase F0 subunit 8207 bp38.6%27.1%8.2%26.1%34.30%−0.521+0.176
ATP6ATP synthase F0 subunit 6681 bp33.2%26.1%9.3%31.4%40.68%−0.545+0.119
COX3Cytochrome c oxidase subunit III784 bp28.7%27.3%15.4%28.6%44.01%−0.299+0.025
ND3NADH dehydrogenase subunit 3346 bp28.3%27.7%14.2%29.8%43.93%−0.355+0.010
ND4LNADH dehydrogenase subunit 4L297 bp31.0%37.0%10.4%21.5%31.99%−0.347−0.089
ND4NADH dehydrogenase subunit 41,375 bp32.7%27.5%11.4%28.4%39.78%−0.426+0.087
ND5NADH dehydrogenase subunit 51,806 bp31.9%26.9%10.9%30.2%41.14%−0.470+0.086
ND6NADH dehydrogenase subunit 6534 bp39.7%21.2%11.2%27.9%39.14%−0.426+0.305
CYTBCytochrome b1,140 bp29.5%26.3%13.1%31.1%44.21%−0.409+0.057
12S rRNA12S ribosomal RNA955 bp34.6%22.4%19.0%24.1%43.04%−0.119+0.213
16S rRNA16S ribosomal RNA1,553 bp35.7%24.7%16.6%23.0%39.60%−0.161+0.183
D-loopControl region (D-loop)1,138 bp32.6%24.8%14.6%28.0%42.62%−0.315+0.136

Codon usage

Counts per codon, darker is more frequent

3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%
UUU96
UUC130
Leu L16.0%
UUA95
UUG17
CUU81
CUC83
CUA299
CUG32
Ile I8.3%
AUU147
AUC168
Met M6.7%
AUA203
AUG51
Val V4.2%
GUU26
GUC36
GUA69
GUG27
Ser S7.8%
UCU49
UCC75
UCA111
UCG5
AGU12
AGC43
Pro P5.4%
CCU41
CCC71
CCA88
CCG6
Thr T9.4%
ACU69
ACC116
ACA159
ACG14
Ala A6.5%
GCU54
GCC95
GCA94
GCG4
Tyr Y3.8%
UAU61
UAC85
His H2.4%
CAU25
CAC67
Gln Q2.6%
CAA86
CAG11
Asn N3.9%
AAU47
AAC100
Lys K2.5%
AAA74
AAG21
Asp D1.8%
GAU20
GAC50
Glu E2.3%
GAA70
GAG18
Cys C0.6%
UGU4
UGC19
Trp W2.7%
UGA85
UGG18
Arg R1.6%
CGU9
CGC14
CGA37
CGG1
Gly G5.4%
GGU37
GGC67
GGA66
GGG36
Stop 0.2%
UAA3
UAG3
AGA0
AGG1

Genome map

38 annotated features in NC_064171.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (40.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,024955 bp+43.0%
tRNA-ValTransfer RNA1,0251,09167 bp+–
16S rRNARibosomal RNA1,0922,6441,553 bp+39.6%
tRNA-Leu (UUR)Transfer RNA2,6452,71975 bp+–
ND1Protein-coding gene2,7223,676955 bp+43.5%
tRNA-IleTransfer RNA3,6773,74670 bp+–
tRNA-GlnTransfer RNA3,7443,81572 bp−–
tRNA-MetTransfer RNA3,8183,88568 bp+–
ND2Protein-coding gene3,8884,9261,039 bp+38.0%
tRNA-TrpTransfer RNA4,9274,99367 bp+–
tRNA-AlaTransfer RNA5,0025,07069 bp−–
tRNA-AsnTransfer RNA5,0725,14473 bp−–
tRNA-CysTransfer RNA5,1785,24467 bp−–
tRNA-TyrTransfer RNA5,2455,31066 bp−–
COX1Protein-coding gene5,3186,8741,557 bp+43.4%
tRNA-Ser (UCN)Transfer RNA6,8636,93169 bp−–
tRNA-AspTransfer RNA6,9357,00369 bp+–
COX2Protein-coding gene7,0047,691688 bp+40.1%
tRNA-LysTransfer RNA7,6927,75867 bp+–
ATP8Protein-coding gene7,7597,965207 bp+34.3%
ATP6Protein-coding gene7,9208,600681 bp+40.7%
COX3Protein-coding gene8,6009,383784 bp+44.0%
tRNA-GlyTransfer RNA9,3849,45067 bp+–
ND3Protein-coding gene9,4519,796346 bp+43.9%
tRNA-ArgTransfer RNA9,7979,86266 bp+–
ND4LProtein-coding gene9,86410,160297 bp+32.0%
ND4Protein-coding gene10,15411,5281,375 bp+39.8%
tRNA-HisTransfer RNA11,52911,59769 bp+–
tRNA-Ser (AGY)Transfer RNA11,59811,65659 bp+–
tRNA-Leu (CUN)Transfer RNA11,65711,72771 bp+–
ND5Protein-coding gene11,73113,5361,806 bp+41.1%
ND6Protein-coding gene13,54014,073534 bp−39.1%
tRNA-GluTransfer RNA14,07414,14269 bp−–
CYTBProtein-coding gene14,14715,2861,140 bp+44.2%
tRNA-ThrTransfer RNA15,28915,35769 bp+–
tRNA-ProTransfer RNA15,36215,43170 bp−–
D-loopControl region15,43216,5691,138 bp–42.6%

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