MitoAge

Leontopithecus rosalia

Golden lion tamarin

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Maximum lifespan
31.6 yr
AnAge record
mtDNA size
16,872 bp
RefSeq NC_021952.1
GC content
37.50%
Whole genome
Non-coding
1,543 bp
Including the D-loop

Where Golden lion tamarin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Golden lion tamarin has the 404th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Golden lion tamarin
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,872 bp
GC skew (G − C) / (G + C)
−0.298
AT skew (A − T) / (A + T)
+0.043

Life history

Maximum lifespan
31.6 years
Adult weight
654.5 g
Birth weight
55.3 g
Female sexual maturity
547 days
Male sexual maturity
2 years
Gestation or incubation
128 days
Litter or clutch size
2
Litters per year
1.8
Postnatal growth rate
0.0077 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02691)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,872 bp
Protein-coding11,337 bp
12S rRNA945 bp
16S rRNA1,555 bp
All tRNA1,502 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp31.2%29.8%10.8%28.2%39.02%−0.448+0.022
ND2NADH dehydrogenase subunit 21,039 bp35.2%30.8%8.0%26.0%33.98%−0.530+0.067
COX1Cytochrome c oxidase subunit I1,542 bp28.0%32.3%16.1%23.6%39.69%−0.190−0.071
COX2Cytochrome c oxidase subunit II688 bp32.3%30.8%12.8%24.1%36.92%−0.307+0.023
ATP8ATP synthase F0 subunit 8207 bp42.0%31.9%6.8%19.3%26.09%−0.481+0.137
ATP6ATP synthase F0 subunit 6681 bp32.6%32.3%9.5%25.6%35.10%−0.456+0.005
COX3Cytochrome c oxidase subunit III784 bp28.8%29.1%14.0%28.1%42.09%−0.333−0.004
ND3NADH dehydrogenase subunit 3346 bp31.5%32.9%11.0%24.6%35.55%−0.382−0.022
ND4LNADH dehydrogenase subunit 4L297 bp30.6%38.7%11.8%18.9%30.64%−0.231−0.117
ND4NADH dehydrogenase subunit 41,375 bp33.1%31.9%10.0%25.0%34.98%−0.430+0.018
ND5NADH dehydrogenase subunit 51,806 bp33.0%30.7%10.8%25.5%36.32%−0.405+0.037
ND6NADH dehydrogenase subunit 6534 bp40.3%23.2%10.3%26.2%36.52%−0.436+0.268
CYTBCytochrome b1,140 bp29.5%29.9%12.4%28.2%40.61%−0.391−0.007
12S rRNA12S ribosomal RNA945 bp34.3%23.9%18.4%23.4%41.80%−0.119+0.178
16S rRNA16S ribosomal RNA1,555 bp35.5%26.8%16.9%20.8%37.75%−0.104+0.141

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU133
UUC101
Leu L16.0%
UUA171
UUG21
CUU90
CUC75
CUA224
CUG26
Ile I9.0%
AUU236
AUC107
Met M6.7%
AUA215
AUG41
Val V3.8%
GUU31
GUC20
GUA77
GUG17
Ser S7.3%
UCU53
UCC62
UCA106
UCG2
AGU15
AGC40
Pro P5.3%
CCU52
CCC58
CCA87
CCG5
Thr T9.0%
ACU90
ACC88
ACA153
ACG11
Ala A6.5%
GCU55
GCC92
GCA91
GCG7
Tyr Y4.0%
UAU94
UAC59
His H2.5%
CAU37
CAC58
Gln Q2.5%
CAA89
CAG7
Asn N4.1%
AAU80
AAC74
Lys K2.4%
AAA82
AAG9
Asp D1.7%
GAU32
GAC34
Glu E2.4%
GAA77
GAG14
Cys C0.6%
UGU11
UGC13
Trp W2.7%
UGA90
UGG13
Arg R1.6%
CGU12
CGC11
CGA37
CGG1
Gly G5.3%
GGU59
GGC54
GGA65
GGG25
Stop 0.2%
UAA5
UAG2
AGA0
AGG0

Genome map

37 annotated features in NC_021952.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (37.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16767 bp+–
12S rRNARibosomal RNA681,012945 bp+41.8%
tRNA-ValTransfer RNA1,0171,08468 bp+–
16S rRNARibosomal RNA1,0752,6291,555 bp+37.8%
tRNA-Leu (UUR)Transfer RNA2,6422,71675 bp+–
ND1Protein-coding gene2,7193,674956 bp+39.0%
tRNA-IleTransfer RNA3,6753,74369 bp+–
tRNA-GlnTransfer RNA3,7413,81272 bp−–
tRNA-MetTransfer RNA3,8163,88368 bp+–
ND2Protein-coding gene3,8864,9241,039 bp+34.0%
tRNA-TrpTransfer RNA4,9254,99167 bp+–
tRNA-AlaTransfer RNA5,0015,06969 bp−–
tRNA-AsnTransfer RNA5,0715,14373 bp−–
tRNA-CysTransfer RNA5,1775,24367 bp−–
tRNA-TyrTransfer RNA5,2435,30967 bp−–
COX1Protein-coding gene5,3176,8581,542 bp+39.7%
tRNA-Ser (UCN)Transfer RNA6,8606,92869 bp−–
tRNA-AspTransfer RNA6,9327,00069 bp+–
COX2Protein-coding gene7,0017,688688 bp+36.9%
tRNA-LysTransfer RNA7,6897,75567 bp+–
ATP8Protein-coding gene7,7567,962207 bp+26.1%
ATP6Protein-coding gene7,9178,597681 bp+35.1%
COX3Protein-coding gene8,5979,380784 bp+42.1%
tRNA-GlyTransfer RNA9,3819,44767 bp+–
ND3Protein-coding gene9,4509,795346 bp+35.6%
tRNA-ArgTransfer RNA9,7969,86166 bp+–
ND4LProtein-coding gene9,86410,160297 bp+30.6%
ND4Protein-coding gene10,15411,5281,375 bp+35.0%
tRNA-HisTransfer RNA11,52911,59769 bp+–
tRNA-Ser (AGY)Transfer RNA11,59811,65659 bp+–
tRNA-Leu (CUN)Transfer RNA11,65711,72771 bp+–
ND5Protein-coding gene11,73113,5361,806 bp+36.3%
ND6Protein-coding gene13,53314,066534 bp−36.5%
tRNA-GluTransfer RNA14,06714,13569 bp−–
CYTBProtein-coding gene14,14015,2791,140 bp+40.6%
tRNA-ThrTransfer RNA15,28215,35069 bp+–
tRNA-ProTransfer RNA15,35415,42269 bp−–

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