MitoAge

Lepus europaeus

European hare

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Maximum lifespan
10.7 yr
AnAge record
mtDNA size
17,734 bp
RefSeq NC_004028.1
GC content
38.73%
Whole genome
Non-coding
2,364 bp
D-loop 2,295 bp

Where European hare sits among 2,335 species

Whole-genome GC content against maximum lifespan. European hare has the 1,535th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %European hare
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,734 bp
GC skew (G − C) / (G + C)
−0.313
AT skew (A − T) / (A + T)
+0.028

Life history

Maximum lifespan
10.7 years
Adult weight
4.2 kg
Birth weight
119.7 g
Body temperature
38.3 °C
Female sexual maturity
236 days
Gestation or incubation
42 days
Litter or clutch size
2
Litters per year
3.8
Postnatal growth rate
0.0191 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02598)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,734 bp
Protein-coding11,336 bp
12S rRNA956 bp
16S rRNA1,579 bp
All tRNA1,500 bp
D-loop2,295 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp29.6%30.4%12.0%28.0%40.02%−0.399−0.014
ND2NADH dehydrogenase subunit 21,044 bp34.8%29.9%9.3%26.1%35.35%−0.474+0.076
COX1Cytochrome c oxidase subunit I1,542 bp27.0%32.2%17.0%23.9%40.86%−0.168−0.088
COX2Cytochrome c oxidase subunit II684 bp29.4%31.1%14.3%25.1%39.47%−0.274−0.029
ATP8ATP synthase F0 subunit 8204 bp35.8%30.9%6.4%27.0%33.33%−0.618+0.074
ATP6ATP synthase F0 subunit 6681 bp31.3%30.1%11.2%27.5%38.62%−0.422+0.019
COX3Cytochrome c oxidase subunit III784 bp27.0%31.6%15.2%26.1%41.33%−0.265−0.078
ND3NADH dehydrogenase subunit 3346 bp30.1%31.8%13.0%25.1%38.15%−0.318−0.028
ND4LNADH dehydrogenase subunit 4L297 bp26.9%38.7%12.5%21.9%34.34%−0.275−0.179
ND4NADH dehydrogenase subunit 41,375 bp31.0%31.9%10.5%26.6%37.16%−0.432−0.014
ND5NADH dehydrogenase subunit 51,812 bp30.8%32.1%10.8%26.2%37.03%−0.416−0.020
ND6NADH dehydrogenase subunit 6525 bp40.6%22.7%7.0%29.7%36.76%−0.617+0.283
CYTBCytochrome b1,140 bp27.7%30.4%12.9%29.0%41.93%−0.385−0.045
12S rRNA12S ribosomal RNA956 bp35.6%24.3%18.6%21.5%40.17%−0.073+0.189
16S rRNA16S ribosomal RNA1,579 bp36.0%25.7%17.4%20.9%38.25%−0.093+0.167
D-loopControl region (D-loop)2,295 bp30.8%29.3%11.8%28.2%39.96%−0.411+0.025

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU146
UUC97
Leu L15.9%
UUA125
UUG14
CUU142
CUC92
CUA210
CUG21
Ile I9.4%
AUU216
AUC140
Met M6.2%
AUA188
AUG46
Val V4.8%
GUU56
GUC39
GUA73
GUG14
Ser S7.7%
UCU65
UCC55
UCA111
UCG5
AGU29
AGC29
Pro P5.1%
CCU61
CCC57
CCA76
CCG1
Thr T7.7%
ACU80
ACC70
ACA131
ACG11
Ala A6.8%
GCU68
GCC95
GCA86
GCG8
Tyr Y3.2%
UAU63
UAC60
His H2.6%
CAU37
CAC60
Gln Q2.4%
CAA79
CAG11
Asn N4.0%
AAU67
AAC86
Lys K2.4%
AAA81
AAG10
Asp D1.8%
GAU31
GAC37
Glu E2.6%
GAA71
GAG26
Cys C0.6%
UGU9
UGC13
Trp W2.7%
UGA95
UGG9
Arg R1.8%
CGU18
CGC6
CGA39
CGG4
Gly G5.7%
GGU46
GGC58
GGA82
GGG31
Stop 0.3%
UAA5
UAG4
AGA0
AGG1

Genome map

38 annotated features in NC_004028.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (38.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16767 bp+–
12S rRNARibosomal RNA681,023956 bp+40.2%
tRNA-ValTransfer RNA1,0241,08966 bp+–
16S rRNARibosomal RNA1,0902,6681,579 bp+38.3%
tRNA-Leu (UUR)Transfer RNA2,6692,74375 bp+–
ND1Protein-coding gene2,7463,702957 bp+40.0%
tRNA-IleTransfer RNA3,7053,76965 bp+–
tRNA-GlnTransfer RNA3,7673,83872 bp−–
tRNA-MetTransfer RNA3,8423,91574 bp+–
ND2Protein-coding gene3,9164,9591,044 bp+35.4%
tRNA-TrpTransfer RNA4,9645,03067 bp+–
tRNA-AlaTransfer RNA5,0335,10068 bp−–
tRNA-AsnTransfer RNA5,1005,17273 bp−–
tRNA-CysTransfer RNA5,2055,27167 bp−–
tRNA-TyrTransfer RNA5,2725,33766 bp−–
COX1Protein-coding gene5,3456,8861,542 bp+40.9%
tRNA-Ser (UCN)Transfer RNA6,8896,95769 bp−–
tRNA-AspTransfer RNA6,9617,02969 bp+–
COX2Protein-coding gene7,0307,713684 bp+39.5%
tRNA-LysTransfer RNA7,7177,78670 bp+–
ATP8Protein-coding gene7,7887,991204 bp+33.3%
ATP6Protein-coding gene7,9498,629681 bp+38.6%
COX3Protein-coding gene8,6299,412784 bp+41.3%
tRNA-GlyTransfer RNA9,4139,48270 bp+–
ND3Protein-coding gene9,4839,828346 bp+38.2%
tRNA-ArgTransfer RNA9,8309,89667 bp+–
ND4LProtein-coding gene9,89810,194297 bp+34.3%
ND4Protein-coding gene10,18811,5621,375 bp+37.2%
tRNA-HisTransfer RNA11,56611,63469 bp+–
tRNA-Ser (AGY)Transfer RNA11,63511,69359 bp+–
tRNA-Leu (CUN)Transfer RNA11,69411,76370 bp+–
ND5Protein-coding gene11,76413,5751,812 bp+37.0%
ND6Protein-coding gene13,57214,096525 bp−36.8%
tRNA-GluTransfer RNA14,09714,16468 bp−–
CYTBProtein-coding gene14,16815,3071,140 bp+41.9%
tRNA-ThrTransfer RNA15,30715,37367 bp+–
tRNA-ProTransfer RNA15,37415,43966 bp−–
D-loopControl region15,44017,7342,295 bp–40.0%

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