Leucaspius delineatus
Belica
GC content
45.05%
Whole genome
Non-coding
990 bp
D-loop 926 bp
Where Belica sits among 2,335 species
Whole-genome GC content against maximum lifespan. Belica has the 2,255th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,602 bp
- GC skew (G − C) / (G + C)
- −0.187
- AT skew (A − T) / (A + T)
- +0.027
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Updated in build 2
- In the database since
- build 1 (2015-07-01)
- Last changed
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,602 bp
Protein-coding11,403 bp
12S rRNA957 bp
16S rRNA1,690 bp
All tRNA1,562 bp
D-loop926 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.92% | −0.199 | −0.129 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 49.28% | −0.293 | 0.000 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.71% | −0.153 | −0.088 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 40.96% | −0.180 | −0.005 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 40.61% | −0.433 | +0.245 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 43.86% | −0.320 | −0.036 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 45.79% | −0.214 | −0.040 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 43.27% | −0.219 | −0.101 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.48% | −0.262 | −0.077 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,382 bp | 44.43% | −0.254 | −0.005 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 44.66% | −0.256 | −0.010 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.13% | −0.350 | +0.399 | |||||
| CYTBCytochrome b | 1,141 bp | 45.14% | −0.227 | −0.070 | |||||
| 12S rRNA12S ribosomal RNA | 957 bp | 50.37% | −0.054 | +0.204 | |||||
| 16S rRNA16S ribosomal RNA | 1,690 bp | 45.15% | −0.009 | +0.219 | |||||
| D-loopControl region (D-loop) | 926 bp | 37.37% | −0.179 | 0.000 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU101
UUC127
Leu L16.3%
UUA110
UUG43
CUU125
CUC115
CUA172
CUG55
Ile I6.9%
AUU177
AUC85
Met M4.7%
AUA102
AUG77
Val V6.8%
GUU78
GUC45
GUA97
GUG38
Ser S6.5%
UCU48
UCC48
UCA69
UCG19
AGU13
AGC49
Pro P5.6%
CCU41
CCC71
CCA80
CCG21
Thr T8.0%
ACU51
ACC111
ACA119
ACG22
Ala A9.0%
GCU49
GCC150
GCA114
GCG31
Tyr Y2.9%
UAU62
UAC50
His H2.7%
CAU35
CAC69
Gln Q2.6%
CAA68
CAG30
Asn N2.9%
AAU52
AAC58
Lys K2.0%
AAA58
AAG19
Asp D2.0%
GAU24
GAC52
Glu E2.7%
GAA67
GAG35
Cys C0.7%
UGU10
UGC16
Trp W3.1%
UGA88
UGG31
Arg R2.0%
CGU13
CGC12
CGA37
CGG15
Gly G6.4%
GGU42
GGC57
GGA88
GGG57
Stop 0.2%
UAA4
UAG3
AGA0
AGG0
Genome map
38 annotated features in NC_020357.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,026 | 957 bp | + | 50.4% |
| tRNA-Val | Transfer RNA | 1,027 | 1,098 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,099 | 2,788 | 1,690 bp | + | 45.2% |
| tRNA-Leu (UUR) | Transfer RNA | 2,789 | 2,864 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,866 | 3,840 | 975 bp | + | 48.9% |
| tRNA-Ile | Transfer RNA | 3,845 | 3,916 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,915 | 3,985 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,987 | 4,055 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,056 | 5,100 | 1,045 bp | + | 49.3% |
| tRNA-Trp | Transfer RNA | 5,101 | 5,171 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,173 | 5,241 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,243 | 5,315 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,348 | 5,415 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,417 | 5,487 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,489 | 7,039 | 1,551 bp | + | 43.7% |
| tRNA-Ser (UCN) | Transfer RNA | 7,040 | 7,110 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,114 | 7,187 | 74 bp | + | – |
| COX2 | Protein-coding gene | 7,201 | 7,891 | 691 bp | + | 41.0% |
| tRNA-Lys | Transfer RNA | 7,892 | 7,967 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,969 | 8,133 | 165 bp | + | 40.6% |
| ATP6 | Protein-coding gene | 8,127 | 8,810 | 684 bp | + | 43.9% |
| COX3 | Protein-coding gene | 8,810 | 9,593 | 784 bp | + | 45.8% |
| tRNA-Gly | Transfer RNA | 9,594 | 9,665 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,666 | 10,014 | 349 bp | + | 43.3% |
| tRNA-Arg | Transfer RNA | 10,015 | 10,083 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,084 | 10,380 | 297 bp | + | 47.5% |
| ND4 | Protein-coding gene | 10,374 | 11,755 | 1,382 bp | + | 44.4% |
| tRNA-His | Transfer RNA | 11,756 | 11,824 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,825 | 11,893 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,895 | 11,967 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,968 | 13,803 | 1,836 bp | + | 44.7% |
| ND6 | Protein-coding gene | 13,800 | 14,321 | 522 bp | − | 47.1% |
| tRNA-Glu | Transfer RNA | 14,322 | 14,390 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,395 | 15,535 | 1,141 bp | + | 45.1% |
| tRNA-Thr | Transfer RNA | 15,536 | 15,607 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,607 | 15,676 | 70 bp | − | – |
| D-loop | Control region | 15,677 | 16,602 | 926 bp | – | 37.4% |