Leuciscus baicalensis
Siberian dace
GC content
46.07%
Whole genome
Non-coding
991 bp
D-loop 927 bp
Where Siberian dace sits among 2,335 species
Whole-genome GC content against maximum lifespan. Siberian dace has the 1,706th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,606 bp
- GC skew (G − C) / (G + C)
- −0.187
- AT skew (A − T) / (A + T)
- +0.032
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,606 bp
Protein-coding11,403 bp
12S rRNA959 bp
16S rRNA1,691 bp
All tRNA1,562 bp
D-loop927 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 50.46% | −0.215 | −0.089 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 50.53% | −0.261 | −0.006 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.39% | −0.153 | −0.084 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.84% | −0.216 | +0.028 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 39.39% | −0.477 | +0.240 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 44.01% | −0.276 | −0.029 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 48.60% | −0.223 | −0.037 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 42.69% | −0.248 | −0.100 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.81% | −0.254 | −0.058 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,382 bp | 45.80% | −0.239 | −0.047 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 46.13% | −0.254 | +0.009 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.66% | −0.283 | +0.358 | |||||
| CYTBCytochrome b | 1,141 bp | 47.15% | −0.238 | −0.061 | |||||
| 12S rRNA12S ribosomal RNA | 959 bp | 49.53% | −0.061 | +0.215 | |||||
| 16S rRNA16S ribosomal RNA | 1,691 bp | 45.54% | −0.023 | +0.236 | |||||
| D-loopControl region (D-loop) | 927 bp | 37.43% | −0.205 | +0.014 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU96
UUC132
Leu L16.4%
UUA110
UUG34
CUU118
CUC110
CUA172
CUG81
Ile I7.0%
AUU163
AUC103
Met M4.6%
AUA93
AUG82
Val V6.6%
GUU61
GUC59
GUA98
GUG32
Ser S6.3%
UCU49
UCC59
UCA61
UCG15
AGU13
AGC43
Pro P5.7%
CCU29
CCC78
CCA92
CCG16
Thr T7.6%
ACU45
ACC110
ACA102
ACG34
Ala A9.3%
GCU50
GCC147
GCA117
GCG40
Tyr Y2.9%
UAU54
UAC57
His H2.7%
CAU24
CAC79
Gln Q2.6%
CAA67
CAG31
Asn N3.0%
AAU43
AAC71
Lys K2.0%
AAA54
AAG24
Asp D2.0%
GAU25
GAC51
Glu E2.7%
GAA54
GAG48
Cys C0.7%
UGU10
UGC16
Trp W3.2%
UGA88
UGG32
Arg R2.0%
CGU11
CGC12
CGA32
CGG22
Gly G6.5%
GGU33
GGC75
GGA85
GGG56
Stop 0.2%
UAA3
UAG4
AGA0
AGG0
Genome map
38 annotated features in NC_024528.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,028 | 959 bp | + | 49.5% |
| tRNA-Val | Transfer RNA | 1,029 | 1,100 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,102 | 2,792 | 1,691 bp | + | 45.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,793 | 2,868 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,869 | 3,843 | 975 bp | + | 50.5% |
| tRNA-Ile | Transfer RNA | 3,848 | 3,919 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,918 | 3,988 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,990 | 4,058 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,059 | 5,103 | 1,045 bp | + | 50.5% |
| tRNA-Trp | Transfer RNA | 5,104 | 5,174 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,176 | 5,244 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,246 | 5,318 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,351 | 5,417 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,419 | 5,489 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,491 | 7,041 | 1,551 bp | + | 45.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,042 | 7,112 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,116 | 7,189 | 74 bp | + | – |
| COX2 | Protein-coding gene | 7,203 | 7,893 | 691 bp | + | 42.8% |
| tRNA-Lys | Transfer RNA | 7,894 | 7,969 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,971 | 8,135 | 165 bp | + | 39.4% |
| ATP6 | Protein-coding gene | 8,129 | 8,812 | 684 bp | + | 44.0% |
| COX3 | Protein-coding gene | 8,812 | 9,595 | 784 bp | + | 48.6% |
| tRNA-Gly | Transfer RNA | 9,596 | 9,667 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,668 | 10,016 | 349 bp | + | 42.7% |
| tRNA-Arg | Transfer RNA | 10,017 | 10,086 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,087 | 10,383 | 297 bp | + | 47.8% |
| ND4 | Protein-coding gene | 10,377 | 11,758 | 1,382 bp | + | 45.8% |
| tRNA-His | Transfer RNA | 11,759 | 11,827 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,828 | 11,896 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,898 | 11,970 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,971 | 13,806 | 1,836 bp | + | 46.1% |
| ND6 | Protein-coding gene | 13,803 | 14,324 | 522 bp | − | 48.7% |
| tRNA-Glu | Transfer RNA | 14,325 | 14,393 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,398 | 15,538 | 1,141 bp | + | 47.2% |
| tRNA-Thr | Transfer RNA | 15,539 | 15,610 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,610 | 15,679 | 70 bp | + | – |
| D-loop | Control region | 15,680 | 16,606 | 927 bp | – | 37.4% |