Leuciscus idus

Ide

Maximum lifespan

29.8 yr

AnAge record

mtDNA size

16,603 bp

RefSeq NC_063524.1

GC content

44.89%

Whole genome

Non-coding

988 bp

D-loop 926 bp

Where Ide sits among 2,335 species

Whole-genome GC content against maximum lifespan. Ide has the 473rd longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,603 bp

GC skew (G − C) / (G + C): −0.203
AT skew (A − T) / (A + T): +0.042

Life history

Maximum lifespan: 29.8 years
Adult weight: 2.2 kg
Female sexual maturity: 5.5 years
Male sexual maturity: 5 years

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 03930)

About this record

Lifespan source: AnAge build 15
Based on: an animal in captivity
Data quality: acceptable, large sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,603 bp

Protein-coding11,402 bp

12S rRNA958 bp

16S rRNA1,691 bp

All tRNA1,564 bp

D-loop926 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Leuciscus idus genes

ND1NADH dehydrogenase subunit 1	975 bp	24.4%	28.4%	18.2%	29.0%	47.18%	−0.230	−0.076
ND2NADH dehydrogenase subunit 2	1,045 bp	26.2%	24.4%	17.6%	31.8%	49.38%	−0.287	+0.036
COX1Cytochrome c oxidase subunit I	1,551 bp	25.1%	29.7%	19.0%	26.2%	45.13%	−0.160	−0.083
COX2Cytochrome c oxidase subunit II	691 bp	29.8%	27.6%	16.4%	26.2%	42.55%	−0.231	+0.038
ATP8ATP synthase F0 subunit 8	165 bp	36.4%	24.2%	10.3%	29.1%	39.39%	−0.477	+0.200
ATP6ATP synthase F0 subunit 6	684 bp	27.9%	29.2%	15.1%	27.8%	42.84%	−0.297	−0.023
COX3Cytochrome c oxidase subunit III	784 bp	26.1%	28.2%	18.1%	27.6%	45.66%	−0.207	−0.038
ND3NADH dehydrogenase subunit 3	349 bp	26.1%	31.8%	15.8%	26.4%	42.12%	−0.252	−0.099
ND4LNADH dehydrogenase subunit 4L	297 bp	25.9%	29.0%	16.5%	28.6%	45.12%	−0.269	−0.055
ND4NADH dehydrogenase subunit 4	1,381 bp	26.6%	28.1%	16.8%	28.5%	45.33%	−0.259	−0.028
ND5NADH dehydrogenase subunit 5	1,836 bp	29.6%	26.5%	14.9%	29.0%	43.85%	−0.322	+0.055
ND6NADH dehydrogenase subunit 6	522 bp	36.8%	15.5%	15.3%	32.2%	47.60%	−0.355	+0.407
CYTBCytochrome b	1,141 bp	25.9%	29.6%	16.5%	28.0%	44.52%	−0.260	−0.068
12S rRNA12S ribosomal RNA	958 bp	30.4%	19.8%	23.6%	26.2%	49.79%	−0.052	+0.210
16S rRNA16S ribosomal RNA	1,691 bp	34.2%	21.1%	21.6%	23.0%	44.65%	−0.030	+0.237
D-loopControl region (D-loop)	926 bp	32.1%	31.4%	14.4%	22.1%	36.50%	−0.213	+0.010

Codon usage

Counts per codon, darker is more frequent

Gene

3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%

UUU99

UUC128

Leu L16.4%

UUA112

UUG28

CUU130

CUC96

CUA195

CUG62

Ile I7.1%

AUU181

AUC89

Met M4.6%

AUA109

AUG65

Val V6.5%

GUU59

GUC58

GUA99

GUG33

Ser S6.4%

UCU52

UCC56

UCA70

UCG7

AGU14

AGC44

Pro P5.6%

CCU32

CCC71

CCA82

CCG28

Thr T7.7%

ACU48

ACC103

ACA116

ACG25

Ala A9.3%

GCU48

GCC152

GCA122

GCG30

Tyr Y2.9%

UAU57

UAC55

His H2.7%

CAU31

CAC72

Gln Q2.6%

CAA81

CAG19

Asn N3.0%

AAU50

AAC64

Lys K2.1%

AAA59

AAG19

Asp D2.0%

GAU22

GAC54

Glu E2.7%

GAA65

GAG37

Cys C0.7%

UGU14

UGC13

Trp W3.2%

UGA99

UGG21

Arg R2.0%

CGU10

CGC13

CGA32

CGG21

Gly G6.5%

GGU31

GGC74

GGA95

GGG46

Stop 0.2%

UAA5

UAG2

AGA0

AGG0

Genome map

38 annotated features in NC_063524.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (44.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Leuciscus idus (NC_063524.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,027	958 bp	+	49.8%
tRNA-Val	Transfer RNA	1,028	1,099	72 bp	+	–
16S rRNA	Ribosomal RNA	1,100	2,790	1,691 bp	+	44.7%
tRNA-Leu (UUR)	Transfer RNA	2,791	2,866	76 bp	+	–
ND1	Protein-coding gene	2,867	3,841	975 bp	+	47.2%
tRNA-Ile	Transfer RNA	3,846	3,916	71 bp	+	–
tRNA-Gln	Transfer RNA	3,916	3,986	71 bp	−	–
tRNA-Met	Transfer RNA	3,986	4,056	71 bp	+	–
ND2	Protein-coding gene	4,057	5,101	1,045 bp	+	49.4%
tRNA-Trp	Transfer RNA	5,102	5,172	71 bp	+	–
tRNA-Ala	Transfer RNA	5,174	5,241	68 bp	−	–
tRNA-Asn	Transfer RNA	5,244	5,316	73 bp	−	–
tRNA-Cys	Transfer RNA	5,349	5,416	68 bp	−	–
tRNA-Tyr	Transfer RNA	5,417	5,487	71 bp	−	–
COX1	Protein-coding gene	5,489	7,039	1,551 bp	+	45.1%
tRNA-Ser (UCN)	Transfer RNA	7,040	7,110	71 bp	−	–
tRNA-Asp	Transfer RNA	7,114	7,187	74 bp	+	–
COX2	Protein-coding gene	7,201	7,891	691 bp	+	42.6%
tRNA-Lys	Transfer RNA	7,892	7,967	76 bp	+	–
ATP8	Protein-coding gene	7,969	8,133	165 bp	+	39.4%
ATP6	Protein-coding gene	8,127	8,810	684 bp	+	42.8%
COX3	Protein-coding gene	8,810	9,593	784 bp	+	45.7%
tRNA-Gly	Transfer RNA	9,594	9,665	72 bp	+	–
ND3	Protein-coding gene	9,666	10,014	349 bp	+	42.1%
tRNA-Arg	Transfer RNA	10,015	10,084	70 bp	+	–
ND4L	Protein-coding gene	10,085	10,381	297 bp	+	45.1%
ND4	Protein-coding gene	10,375	11,755	1,381 bp	+	45.3%
tRNA-His	Transfer RNA	11,757	11,825	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,826	11,895	70 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,896	11,968	73 bp	+	–
ND5	Protein-coding gene	11,969	13,804	1,836 bp	+	43.9%
ND6	Protein-coding gene	13,801	14,322	522 bp	−	47.6%
tRNA-Glu	Transfer RNA	14,323	14,391	69 bp	−	–
CYTB	Protein-coding gene	14,396	15,536	1,141 bp	+	44.5%
tRNA-Thr	Transfer RNA	15,537	15,607	71 bp	+	–
tRNA-Pro	Transfer RNA	15,608	15,677	70 bp	−	–
D-loop	Control region	15,678	16,603	926 bp	–	36.5%