Luciobarbus sclateri
Andalusian barbel
GC content
44.32%
Whole genome
Non-coding
1,011 bp
D-loop 941 bp
Where Andalusian barbel sits among 2,335 species
Whole-genome GC content against maximum lifespan. Andalusian barbel has the 1,044th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,608 bp
- GC skew (G − C) / (G + C)
- −0.259
- AT skew (A − T) / (A + T)
- +0.129
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,608 bp
Protein-coding11,403 bp
12S rRNA953 bp
16S rRNA1,681 bp
All tRNA1,560 bp
D-loop941 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 987 bp | 47.32% | −0.353 | +0.096 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 46.70% | −0.365 | +0.199 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.52% | −0.210 | −0.001 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.40% | −0.270 | +0.101 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 35.76% | −0.424 | +0.151 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 43.05% | −0.388 | +0.095 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 46.88% | −0.288 | +0.055 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 43.84% | −0.255 | −0.010 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.48% | −0.319 | −0.013 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 44.46% | −0.345 | +0.108 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,824 bp | 41.39% | −0.359 | +0.108 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.36% | −0.405 | +0.529 | |||||
| CYTBCytochrome b | 1,141 bp | 44.96% | −0.326 | +0.041 | |||||
| 12S rRNA12S ribosomal RNA | 953 bp | 48.79% | −0.114 | +0.238 | |||||
| 16S rRNA16S ribosomal RNA | 1,681 bp | 44.44% | −0.066 | +0.304 | |||||
| D-loopControl region (D-loop) | 941 bp | 35.71% | −0.202 | +0.078 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU86
UUC145
Leu L16.3%
UUA95
UUG15
CUU77
CUC93
CUA267
CUG72
Ile I7.4%
AUU141
AUC142
Met M4.8%
AUA134
AUG49
Val V6.1%
GUU47
GUC53
GUA99
GUG34
Ser S6.1%
UCU37
UCC52
UCA88
UCG8
AGU10
AGC38
Pro P5.5%
CCU17
CCC57
CCA127
CCG9
Thr T8.1%
ACU37
ACC109
ACA151
ACG12
Ala A8.6%
GCU43
GCC156
GCA124
GCG6
Tyr Y3.0%
UAU48
UAC65
His H2.8%
CAU16
CAC90
Gln Q2.7%
CAA94
CAG8
Asn N3.3%
AAU30
AAC95
Lys K2.0%
AAA73
AAG3
Asp D1.9%
GAU16
GAC57
Glu E2.8%
GAA76
GAG29
Cys C0.7%
UGU8
UGC17
Trp W3.2%
UGA106
UGG14
Arg R2.0%
CGU11
CGC9
CGA44
CGG11
Gly G6.5%
GGU20
GGC59
GGA122
GGG47
Stop 0.2%
UAA6
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_031532.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,022 | 953 bp | + | 48.8% |
| tRNA-Val | Transfer RNA | 1,023 | 1,094 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,095 | 2,775 | 1,681 bp | + | 44.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,776 | 2,851 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,853 | 3,839 | 987 bp | + | 47.3% |
| tRNA-Ile | Transfer RNA | 3,845 | 3,916 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,915 | 3,985 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,987 | 4,055 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,056 | 5,100 | 1,045 bp | + | 46.7% |
| tRNA-Trp | Transfer RNA | 5,101 | 5,172 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,175 | 5,243 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,245 | 5,317 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,351 | 5,417 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,417 | 5,487 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,489 | 7,039 | 1,551 bp | + | 45.5% |
| tRNA-Ser (UCN) | Transfer RNA | 7,040 | 7,110 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,114 | 7,185 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,199 | 7,889 | 691 bp | + | 42.4% |
| tRNA-Lys | Transfer RNA | 7,890 | 7,965 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,967 | 8,131 | 165 bp | + | 35.8% |
| ATP6 | Protein-coding gene | 8,125 | 8,807 | 683 bp | + | 43.1% |
| COX3 | Protein-coding gene | 8,808 | 9,592 | 785 bp | + | 46.9% |
| tRNA-Gly | Transfer RNA | 9,593 | 9,664 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,665 | 10,013 | 349 bp | + | 43.8% |
| tRNA-Arg | Transfer RNA | 10,014 | 10,083 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,084 | 10,380 | 297 bp | + | 47.5% |
| ND4 | Protein-coding gene | 10,374 | 11,754 | 1,381 bp | + | 44.5% |
| tRNA-His | Transfer RNA | 11,756 | 11,823 | 68 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,825 | 11,894 | 70 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,895 | 11,967 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,971 | 13,794 | 1,824 bp | + | 41.4% |
| ND6 | Protein-coding gene | 13,791 | 14,312 | 522 bp | − | 46.4% |
| tRNA-Glu | Transfer RNA | 14,313 | 14,381 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,386 | 15,526 | 1,141 bp | + | 45.0% |
| tRNA-Thr | Transfer RNA | 15,527 | 15,598 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,598 | 15,667 | 70 bp | − | – |
| D-loop | Control region | 15,668 | 16,608 | 941 bp | – | 35.7% |