MitoAge

Lutjanus argentimaculatus

Mangrove jack

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Maximum lifespan
18 yr
AnAge record
mtDNA size
16,543 bp
RefSeq NC_016661.1
GC content
47.07%
Whole genome
Non-coding
933 bp
D-loop 872 bp

Where Mangrove jack sits among 2,335 species

Whole-genome GC content against maximum lifespan. Mangrove jack has the 1,031st longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Mangrove jack
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,543 bp
GC skew (G − C) / (G + C)
−0.315
AT skew (A − T) / (A + T)
+0.067

Life history

Maximum lifespan
18 years
Adult weight
4.8 kg
Female sexual maturity
5 years
Male sexual maturity
4 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04219)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,543 bp
Protein-coding11,407 bp
12S rRNA952 bp
16S rRNA1,697 bp
All tRNA1,554 bp
D-loop872 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp25.5%25.7%14.1%34.7%48.72%−0.423−0.004
ND2NADH dehydrogenase subunit 21,046 bp26.9%22.8%12.1%38.1%50.29%−0.517+0.081
COX1Cytochrome c oxidase subunit I1,551 bp25.1%27.4%18.2%29.2%47.45%−0.231−0.043
COX2Cytochrome c oxidase subunit II691 bp29.1%27.4%15.6%27.9%43.56%−0.282+0.031
ATP8ATP synthase F0 subunit 8168 bp28.0%25.6%11.3%35.1%46.43%−0.513+0.044
ATP6ATP synthase F0 subunit 6684 bp26.3%26.8%12.6%34.4%46.93%−0.464−0.008
COX3Cytochrome c oxidase subunit III785 bp25.2%23.9%16.6%34.3%50.83%−0.348+0.026
ND3NADH dehydrogenase subunit 3349 bp18.9%31.5%15.5%34.1%49.57%−0.376−0.250
ND4LNADH dehydrogenase subunit 4L297 bp22.2%27.3%15.8%34.7%50.51%−0.373−0.102
ND4NADH dehydrogenase subunit 41,381 bp26.4%24.9%15.0%33.7%48.66%−0.384+0.030
ND5NADH dehydrogenase subunit 51,839 bp27.5%24.5%13.7%34.4%48.07%−0.430+0.058
ND6NADH dehydrogenase subunit 6522 bp38.7%14.4%13.4%33.5%46.94%−0.429+0.458
CYTBCytochrome b1,141 bp26.1%26.5%14.8%32.6%47.42%−0.375−0.007
12S rRNA12S ribosomal RNA952 bp31.1%20.8%21.6%26.5%48.11%−0.100+0.198
16S rRNA16S ribosomal RNA1,697 bp32.5%20.4%19.9%27.2%47.08%−0.154+0.229
D-loopControl region (D-loop)872 bp33.1%31.2%14.4%21.2%35.67%−0.190+0.030

Codon usage

Counts per codon, darker is more frequent

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU75
UUC156
Leu L17.7%
UUA62
UUG25
CUU120
CUC192
CUA232
CUG43
Ile I7.0%
AUU113
AUC155
Met M4.0%
AUA89
AUG64
Val V5.7%
GUU49
GUC84
GUA67
GUG17
Ser S6.3%
UCU43
UCC76
UCA58
UCG10
AGU7
AGC45
Pro P5.9%
CCU44
CCC111
CCA56
CCG12
Thr T7.9%
ACU32
ACC135
ACA122
ACG10
Ala A9.2%
GCU69
GCC160
GCA103
GCG17
Tyr Y2.9%
UAU31
UAC79
His H2.8%
CAU19
CAC87
Gln Q2.6%
CAA85
CAG13
Asn N3.2%
AAU26
AAC96
Lys K1.9%
AAA67
AAG7
Asp D1.9%
GAU15
GAC58
Glu E2.7%
GAA77
GAG24
Cys C0.6%
UGU4
UGC20
Trp W3.2%
UGA105
UGG16
Arg R2.0%
CGU13
CGC14
CGA45
CGG3
Gly G6.4%
GGU31
GGC92
GGA86
GGG34
Stop 0.2%
UAA6
UAG1
AGA0
AGG0

Genome map

38 annotated features in NC_016661.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (47.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,020952 bp+48.1%
tRNA-ValTransfer RNA1,0211,09272 bp+–
16S rRNARibosomal RNA1,0932,7891,697 bp+47.1%
tRNA-Leu (UUR)Transfer RNA2,7902,86071 bp+–
ND1Protein-coding gene2,8613,835975 bp+48.7%
tRNA-IleTransfer RNA3,8393,90870 bp+–
tRNA-GlnTransfer RNA3,9083,97871 bp−–
tRNA-MetTransfer RNA3,9784,04669 bp+–
ND2Protein-coding gene4,0475,0921,046 bp+50.3%
tRNA-TrpTransfer RNA5,0935,16472 bp+–
tRNA-AlaTransfer RNA5,1655,23369 bp−–
tRNA-AsnTransfer RNA5,2355,30773 bp−–
tRNA-CysTransfer RNA5,3475,41468 bp−–
tRNA-TyrTransfer RNA5,4155,48470 bp−–
COX1Protein-coding gene5,4867,0361,551 bp+47.5%
tRNA-Ser (UCN)Transfer RNA7,0387,10871 bp−–
tRNA-AspTransfer RNA7,1127,18372 bp+–
COX2Protein-coding gene7,1907,880691 bp+43.6%
tRNA-LysTransfer RNA7,8817,95575 bp+–
ATP8Protein-coding gene7,9578,124168 bp+46.4%
ATP6Protein-coding gene8,1158,798684 bp+46.9%
COX3Protein-coding gene8,7989,582785 bp+50.8%
tRNA-GlyTransfer RNA9,5839,65472 bp+–
ND3Protein-coding gene9,65510,003349 bp+49.6%
tRNA-ArgTransfer RNA10,00410,07269 bp+–
ND4LProtein-coding gene10,07310,369297 bp+50.5%
ND4Protein-coding gene10,36311,7431,381 bp+48.7%
tRNA-HisTransfer RNA11,74411,81269 bp+–
tRNA-Ser (AGY)Transfer RNA11,81311,88472 bp+–
tRNA-Leu (CUN)Transfer RNA11,88511,95773 bp+–
ND5Protein-coding gene11,95813,7961,839 bp+48.1%
ND6Protein-coding gene13,79314,314522 bp−46.9%
tRNA-GluTransfer RNA14,31514,38369 bp−–
CYTBProtein-coding gene14,39015,5301,141 bp+47.4%
tRNA-ThrTransfer RNA15,53115,60272 bp+–
tRNA-ProTransfer RNA15,60315,67169 bp−–
D-loopControl region15,67216,543872 bp–35.7%

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