Lutjanus carponotatus

Spanish flag snapper

Maximum lifespan

20 yr

AnAge record

mtDNA size

16,514 bp

RefSeq NC_044104.1

GC content

46.64%

Whole genome

Non-coding

899 bp

D-loop 840 bp

Where Spanish flag snapper sits among 2,335 species

Whole-genome GC content against maximum lifespan. Spanish flag snapper has the 946th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,514 bp

GC skew (G − C) / (G + C): −0.305
AT skew (A − T) / (A + T): +0.050

Life history

Maximum lifespan: 20 years
Female sexual maturity: 2.1 years

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04222)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,514 bp

Protein-coding11,407 bp

12S rRNA952 bp

16S rRNA1,697 bp

All tRNA1,562 bp

D-loop840 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Lutjanus carponotatus genes

ND1NADH dehydrogenase subunit 1	975 bp	24.3%	26.3%	14.9%	34.6%	49.44%	−0.398	−0.039
ND2NADH dehydrogenase subunit 2	1,046 bp	28.1%	23.5%	11.4%	37.0%	48.38%	−0.530	+0.089
COX1Cytochrome c oxidase subunit I	1,551 bp	25.1%	29.4%	18.7%	26.8%	45.52%	−0.178	−0.079
COX2Cytochrome c oxidase subunit II	691 bp	28.4%	27.5%	15.6%	28.5%	44.14%	−0.292	+0.016
ATP8ATP synthase F0 subunit 8	168 bp	28.6%	25.6%	10.7%	35.1%	45.83%	−0.532	+0.055
ATP6ATP synthase F0 subunit 6	683 bp	24.6%	27.5%	12.9%	35.0%	47.88%	−0.462	−0.056
COX3Cytochrome c oxidase subunit III	785 bp	24.8%	25.1%	17.5%	32.6%	50.06%	−0.303	−0.005
ND3NADH dehydrogenase subunit 3	349 bp	20.9%	31.8%	13.8%	33.5%	47.28%	−0.418	−0.207
ND4LNADH dehydrogenase subunit 4L	297 bp	22.6%	26.9%	14.5%	36.0%	50.51%	−0.427	−0.088
ND4NADH dehydrogenase subunit 4	1,381 bp	25.3%	25.4%	15.3%	34.0%	49.31%	−0.380	−0.003
ND5NADH dehydrogenase subunit 5	1,839 bp	28.1%	25.2%	13.3%	33.4%	46.66%	−0.431	+0.054
ND6NADH dehydrogenase subunit 6	522 bp	39.8%	15.1%	12.8%	32.2%	45.02%	−0.430	+0.449
CYTBCytochrome b	1,141 bp	24.6%	28.2%	15.2%	32.0%	47.15%	−0.357	−0.068
12S rRNA12S ribosomal RNA	952 bp	31.0%	21.5%	21.5%	25.9%	47.48%	−0.093	+0.180
16S rRNA16S ribosomal RNA	1,697 bp	32.8%	20.2%	20.1%	26.9%	47.02%	−0.145	+0.237
D-loopControl region (D-loop)	840 bp	31.8%	31.1%	15.5%	21.7%	37.14%	−0.167	+0.011

Codon usage

Counts per codon, darker is more frequent

Gene

3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%

UUU79

UUC153

Leu L17.6%

UUA60

UUG14

CUU158

CUC181

CUA208

CUG50

Ile I7.0%

AUU134

AUC131

Met M4.0%

AUA77

AUG75

Val V5.8%

GUU60

GUC78

GUA67

GUG17

Ser S6.4%

UCU44

UCC78

UCA58

UCG9

AGU13

AGC41

Pro P5.9%

CCU61

CCC93

CCA68

CCG2

Thr T7.9%

ACU48

ACC126

ACA116

ACG9

Ala A9.1%

GCU64

GCC163

GCA106

GCG13

Tyr Y2.9%

UAU32

UAC78

His H2.8%

CAU26

CAC79

Gln Q2.6%

CAA86

CAG13

Asn N3.2%

AAU27

AAC93

Lys K1.9%

AAA73

AAG1

Asp D1.9%

GAU17

GAC57

Glu E2.7%

GAA77

GAG24

Cys C0.6%

UGU5

UGC19

Trp W3.2%

UGA106

UGG14

Arg R2.0%

CGU14

CGC15

CGA38

CGG9

Gly G6.4%

GGU26

GGC87

GGA92

GGG38

Stop 0.2%

UAA5

UAG1

AGA0

AGG0

Genome map

38 annotated features in NC_044104.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (46.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Lutjanus carponotatus (NC_044104.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	69	69 bp	+	–
12S rRNA	Ribosomal RNA	70	1,021	952 bp	+	47.5%
tRNA-Val	Transfer RNA	1,022	1,094	73 bp	+	–
16S rRNA	Ribosomal RNA	1,095	2,791	1,697 bp	+	47.0%
tRNA-Leu (UUR)	Transfer RNA	2,792	2,865	74 bp	+	–
ND1	Protein-coding gene	2,866	3,840	975 bp	+	49.4%
tRNA-Ile	Transfer RNA	3,844	3,913	70 bp	+	–
tRNA-Gln	Transfer RNA	3,913	3,983	71 bp	−	–
tRNA-Met	Transfer RNA	3,982	4,052	71 bp	+	–
ND2	Protein-coding gene	4,052	5,097	1,046 bp	+	48.4%
tRNA-Trp	Transfer RNA	5,098	5,169	72 bp	+	–
tRNA-Ala	Transfer RNA	5,169	5,238	70 bp	−	–
tRNA-Asn	Transfer RNA	5,240	5,312	73 bp	−	–
tRNA-Cys	Transfer RNA	5,345	5,416	72 bp	−	–
tRNA-Tyr	Transfer RNA	5,416	5,486	71 bp	−	–
COX1	Protein-coding gene	5,488	7,038	1,551 bp	+	45.5%
tRNA-Ser (UCN)	Transfer RNA	7,041	7,109	69 bp	−	–
tRNA-Asp	Transfer RNA	7,114	7,185	72 bp	+	–
COX2	Protein-coding gene	7,193	7,883	691 bp	+	44.1%
tRNA-Lys	Transfer RNA	7,884	7,959	76 bp	+	–
ATP8	Protein-coding gene	7,960	8,127	168 bp	+	45.8%
ATP6	Protein-coding gene	8,118	8,800	683 bp	+	47.9%
COX3	Protein-coding gene	8,801	9,585	785 bp	+	50.1%
tRNA-Gly	Transfer RNA	9,586	9,657	72 bp	+	–
ND3	Protein-coding gene	9,658	10,006	349 bp	+	47.3%
tRNA-Arg	Transfer RNA	10,006	10,076	71 bp	+	–
ND4L	Protein-coding gene	10,076	10,372	297 bp	+	50.5%
ND4	Protein-coding gene	10,366	11,746	1,381 bp	+	49.3%
tRNA-His	Transfer RNA	11,747	11,815	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,816	11,884	69 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,888	11,960	73 bp	+	–
ND5	Protein-coding gene	11,961	13,799	1,839 bp	+	46.7%
ND6	Protein-coding gene	13,796	14,317	522 bp	−	45.0%
tRNA-Glu	Transfer RNA	14,318	14,386	69 bp	−	–
CYTB	Protein-coding gene	14,393	15,533	1,141 bp	+	47.2%
tRNA-Thr	Transfer RNA	15,534	15,606	73 bp	+	–
tRNA-Pro	Transfer RNA	15,605	15,674	70 bp	−	–
D-loop	Control region	15,675	16,514	840 bp	–	37.1%