Lutjanus rivulatus
Blubberlip snapper
GC content
47.31%
Whole genome
Non-coding
906 bp
D-loop 842 bp
Where Blubberlip snapper sits among 2,335 species
Whole-genome GC content against maximum lifespan. Blubberlip snapper has the 116th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,511 bp
- GC skew (G − C) / (G + C)
- −0.310
- AT skew (A − T) / (A + T)
- +0.058
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,511 bp
Protein-coding11,407 bp
12S rRNA949 bp
16S rRNA1,697 bp
All tRNA1,552 bp
D-loop842 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.10% | −0.394 | −0.032 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.86% | −0.485 | +0.074 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 47.13% | −0.220 | −0.046 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.72% | −0.288 | +0.021 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.487 | +0.022 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 49.49% | −0.426 | −0.038 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.55% | −0.321 | −0.030 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 52.44% | −0.421 | −0.181 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 53.20% | −0.418 | −0.065 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 49.46% | −0.391 | +0.014 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.42% | −0.438 | +0.034 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 47.32% | −0.449 | +0.498 | |||||
| CYTBCytochrome b | 1,141 bp | 47.42% | −0.383 | −0.043 | |||||
| 12S rRNA12S ribosomal RNA | 949 bp | 47.31% | −0.091 | +0.192 | |||||
| 16S rRNA16S ribosomal RNA | 1,697 bp | 47.08% | −0.161 | +0.245 | |||||
| D-loopControl region (D-loop) | 842 bp | 37.89% | −0.154 | +0.013 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU83
UUC148
Leu L17.7%
UUA57
UUG22
CUU141
CUC196
CUA204
CUG53
Ile I7.1%
AUU117
AUC154
Met M4.0%
AUA79
AUG74
Val V5.6%
GUU63
GUC74
GUA61
GUG16
Ser S6.4%
UCU34
UCC84
UCA61
UCG12
AGU9
AGC44
Pro P5.9%
CCU58
CCC103
CCA53
CCG11
Thr T7.9%
ACU42
ACC131
ACA112
ACG14
Ala A9.1%
GCU51
GCC175
GCA108
GCG13
Tyr Y2.9%
UAU31
UAC80
His H2.8%
CAU25
CAC80
Gln Q2.6%
CAA87
CAG12
Asn N3.1%
AAU26
AAC93
Lys K1.9%
AAA69
AAG5
Asp D1.9%
GAU12
GAC60
Glu E2.7%
GAA76
GAG25
Cys C0.6%
UGU5
UGC19
Trp W3.2%
UGA103
UGG17
Arg R2.0%
CGU12
CGC13
CGA45
CGG6
Gly G6.4%
GGU24
GGC94
GGA76
GGG48
Stop 0.2%
UAA4
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_009869.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,017 | 949 bp | + | 47.3% |
| tRNA-Val | Transfer RNA | 1,018 | 1,089 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,090 | 2,786 | 1,697 bp | + | 47.1% |
| tRNA-Leu (UUR) | Transfer RNA | 2,787 | 2,860 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,861 | 3,835 | 975 bp | + | 48.1% |
| tRNA-Ile | Transfer RNA | 3,839 | 3,908 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,908 | 3,978 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,978 | 4,046 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,047 | 5,092 | 1,046 bp | + | 50.9% |
| tRNA-Trp | Transfer RNA | 5,093 | 5,164 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,165 | 5,233 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,235 | 5,307 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,345 | 5,411 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,412 | 5,481 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,483 | 7,033 | 1,551 bp | + | 47.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,035 | 7,105 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,109 | 7,180 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,188 | 7,878 | 691 bp | + | 44.7% |
| tRNA-Lys | Transfer RNA | 7,879 | 7,953 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,955 | 8,122 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,113 | 8,795 | 683 bp | + | 49.5% |
| COX3 | Protein-coding gene | 8,796 | 9,580 | 785 bp | + | 49.6% |
| tRNA-Gly | Transfer RNA | 9,581 | 9,652 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,653 | 10,001 | 349 bp | + | 52.4% |
| tRNA-Arg | Transfer RNA | 10,002 | 10,070 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,071 | 10,367 | 297 bp | + | 53.2% |
| ND4 | Protein-coding gene | 10,361 | 11,741 | 1,381 bp | + | 49.5% |
| tRNA-His | Transfer RNA | 11,742 | 11,810 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,811 | 11,878 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,883 | 11,955 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,956 | 13,794 | 1,839 bp | + | 47.4% |
| ND6 | Protein-coding gene | 13,791 | 14,312 | 522 bp | − | 47.3% |
| tRNA-Glu | Transfer RNA | 14,313 | 14,381 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,388 | 15,528 | 1,141 bp | + | 47.4% |
| tRNA-Thr | Transfer RNA | 15,529 | 15,600 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,600 | 15,669 | 70 bp | − | – |
| D-loop | Control region | 15,670 | 16,511 | 842 bp | – | 37.9% |