Lutjanus synagris
Lane snapper
GC content
47.29%
Whole genome
Non-coding
897 bp
Including the D-loop
Where Lane snapper sits among 2,335 species
Whole-genome GC content against maximum lifespan. Lane snapper has the 1,578th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,504 bp
- GC skew (G − C) / (G + C)
- −0.308
- AT skew (A − T) / (A + T)
- +0.062
Life history
- Maximum lifespan
- 10 years
- Adult weight
- 1.9 kg
- Female sexual maturity
- 2 years
- Male sexual maturity
- 365 days
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04233)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,504 bp
Protein-coding11,407 bp
12S rRNA951 bp
16S rRNA1,697 bp
All tRNA1,552 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.92% | −0.417 | −0.012 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 50.96% | −0.508 | +0.096 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.97% | −0.198 | −0.048 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.71% | −0.278 | +0.008 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.538 | +0.067 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 48.83% | −0.449 | −0.034 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 49.55% | −0.326 | −0.005 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 50.43% | −0.375 | −0.237 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.85% | −0.416 | −0.091 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 49.46% | −0.420 | +0.043 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.15% | −0.421 | +0.045 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.28% | −0.429 | +0.481 | |||||
| CYTBCytochrome b | 1,141 bp | 48.55% | −0.354 | −0.046 | |||||
| 12S rRNA12S ribosomal RNA | 951 bp | 48.16% | −0.105 | +0.201 | |||||
| 16S rRNA16S ribosomal RNA | 1,697 bp | 47.38% | −0.147 | +0.236 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU86
UUC146
Leu L17.6%
UUA59
UUG15
CUU138
CUC181
CUA225
CUG51
Ile I6.9%
AUU110
AUC153
Met M4.0%
AUA72
AUG79
Val V5.8%
GUU61
GUC73
GUA62
GUG26
Ser S6.3%
UCU42
UCC81
UCA55
UCG10
AGU9
AGC42
Pro P5.9%
CCU52
CCC110
CCA57
CCG6
Thr T7.9%
ACU41
ACC126
ACA118
ACG15
Ala A9.2%
GCU56
GCC179
GCA104
GCG13
Tyr Y2.9%
UAU30
UAC81
His H2.8%
CAU21
CAC84
Gln Q2.6%
CAA94
CAG5
Asn N3.2%
AAU24
AAC98
Lys K1.9%
AAA70
AAG4
Asp D1.9%
GAU17
GAC55
Glu E2.7%
GAA80
GAG21
Cys C0.6%
UGU3
UGC21
Trp W3.2%
UGA107
UGG13
Arg R2.0%
CGU14
CGC14
CGA42
CGG6
Gly G6.4%
GGU25
GGC89
GGA85
GGG44
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
37 annotated features in NC_082572.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,019 | 951 bp | + | 48.2% |
| tRNA-Val | Transfer RNA | 1,020 | 1,091 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,092 | 2,788 | 1,697 bp | + | 47.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,789 | 2,862 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,863 | 3,837 | 975 bp | + | 48.9% |
| tRNA-Ile | Transfer RNA | 3,841 | 3,910 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,910 | 3,980 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,980 | 4,048 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,049 | 5,094 | 1,046 bp | + | 51.0% |
| tRNA-Trp | Transfer RNA | 5,095 | 5,166 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,167 | 5,235 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,237 | 5,309 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,349 | 5,415 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,416 | 5,485 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,487 | 7,037 | 1,551 bp | + | 46.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,040 | 7,110 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,114 | 7,185 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,192 | 7,882 | 691 bp | + | 43.7% |
| tRNA-Lys | Transfer RNA | 7,883 | 7,957 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,959 | 8,126 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,117 | 8,800 | 684 bp | + | 48.8% |
| COX3 | Protein-coding gene | 8,800 | 9,584 | 785 bp | + | 49.6% |
| tRNA-Gly | Transfer RNA | 9,585 | 9,656 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,657 | 10,005 | 349 bp | + | 50.4% |
| tRNA-Arg | Transfer RNA | 10,006 | 10,074 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,075 | 10,371 | 297 bp | + | 51.9% |
| ND4 | Protein-coding gene | 10,365 | 11,745 | 1,381 bp | + | 49.5% |
| tRNA-His | Transfer RNA | 11,746 | 11,814 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,815 | 11,882 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,887 | 11,959 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,960 | 13,798 | 1,839 bp | + | 47.2% |
| ND6 | Protein-coding gene | 13,795 | 14,316 | 522 bp | − | 48.3% |
| tRNA-Glu | Transfer RNA | 14,317 | 14,385 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,392 | 15,532 | 1,141 bp | + | 48.6% |
| tRNA-Thr | Transfer RNA | 15,533 | 15,604 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,604 | 15,673 | 70 bp | − | – |