Macaca assamensis

Assam macaque

Maximum lifespan

31.4 yr

AnAge record

mtDNA size

16,542 bp

RefSeq NC_023795.1

GC content

43.30%

Whole genome

Non-coding

1,193 bp

D-loop 1,091 bp

Where Assam macaque sits among 2,335 species

Whole-genome GC content against maximum lifespan. Assam macaque has the 408th longest lifespan of them.

This species
Other mammals
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,542 bp

GC skew (G − C) / (G + C): −0.393
AT skew (A − T) / (A + T): +0.111

Life history

Maximum lifespan: 31.4 years
Adult weight: 9.1 kg

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02737)

About this record

Lifespan source: AnAge build 15
Based on: an animal in captivity
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Updated in build 2
In the database since: build 1 (2015-07-01)
Last changed: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,542 bp

Protein-coding11,370 bp

12S rRNA947 bp

16S rRNA1,560 bp

All tRNA1,502 bp

D-loop1,091 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Macaca assamensis genes

ND1NADH dehydrogenase subunit 1	955 bp	29.6%	25.1%	11.4%	33.8%	45.24%	−0.495	+0.082
ND2NADH dehydrogenase subunit 2	1,042 bp	33.6%	23.5%	8.6%	34.3%	42.90%	−0.597	+0.176
COX1Cytochrome c oxidase subunit I	1,569 bp	26.2%	29.9%	16.8%	27.2%	43.91%	−0.237	−0.066
COX2Cytochrome c oxidase subunit II	684 bp	30.3%	26.6%	15.4%	27.8%	43.13%	−0.288	+0.064
ATP8ATP synthase F0 subunit 8	207 bp	37.2%	24.2%	7.7%	30.9%	38.65%	−0.600	+0.213
ATP6ATP synthase F0 subunit 6	681 bp	31.3%	24.4%	10.6%	33.8%	44.35%	−0.523	+0.124
COX3Cytochrome c oxidase subunit III	784 bp	26.9%	28.2%	14.5%	30.4%	44.90%	−0.352	−0.023
ND3NADH dehydrogenase subunit 3	346 bp	30.3%	27.2%	12.1%	30.3%	42.49%	−0.429	+0.055
ND4LNADH dehydrogenase subunit 4L	297 bp	25.9%	30.3%	13.8%	30.0%	43.77%	−0.369	−0.078
ND4NADH dehydrogenase subunit 4	1,378 bp	31.7%	26.1%	9.6%	32.7%	42.24%	−0.546	+0.098
ND5NADH dehydrogenase subunit 5	1,812 bp	31.6%	25.5%	10.6%	32.3%	42.94%	−0.506	+0.106
ND6NADH dehydrogenase subunit 6	528 bp	40.2%	16.9%	7.4%	35.6%	42.99%	−0.656	+0.409
CYTBCytochrome b	1,141 bp	28.9%	25.4%	12.0%	33.7%	45.66%	−0.474	+0.065
12S rRNA12S ribosomal RNA	947 bp	33.3%	21.6%	19.2%	25.9%	45.09%	−0.148	+0.212
16S rRNA16S ribosomal RNA	1,560 bp	35.6%	21.9%	17.6%	25.0%	42.56%	−0.175	+0.239
D-loopControl region (D-loop)	1,091 bp	29.9%	26.1%	12.8%	31.2%	44.00%	−0.417	+0.067

Codon usage

Counts per codon, darker is more frequent

Gene

3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.5%

UUU77

UUC134

Leu L16.6%

UUA79

UUG22

CUU77

CUC137

CUA268

CUG50

Ile I8.4%

AUU127

AUC191

Met M5.9%

AUA184

AUG41

Val V4.2%

GUU44

GUC34

GUA61

GUG19

Ser S7.2%

UCU50

UCC75

UCA74

UCG11

AGU15

AGC48

Pro P5.7%

CCU41

CCC101

CCA66

CCG8

Thr T9.9%

ACU60

ACC140

ACA160

ACG15

Ala A6.7%

GCU55

GCC113

GCA78

GCG9

Tyr Y3.5%

UAU54

UAC80

His H2.5%

CAU28

CAC67

Gln Q2.6%

CAA91

CAG7

Asn N4.3%

AAU36

AAC128

Lys K2.4%

AAA84

AAG7

Asp D1.7%

GAU25

GAC41

Glu E2.2%

GAA67

GAG18

Cys C0.7%

UGU5

UGC22

Trp W2.7%

UGA80

UGG22

Arg R1.8%

CGU9

CGC27

CGA28

CGG4

Gly G5.4%

GGU35

GGC78

GGA61

GGG31

Stop 0.2%

UAA5

UAG1

AGA0

AGG1

Genome map

38 annotated features in NC_023795.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (43.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

Not drawn: D-loop 1–16,540, annotated over most of the record.

All 37 features as a table

Annotated features of Macaca assamensis (NC_023795.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	522	594	73 bp	+	–
12S rRNA	Ribosomal RNA	594	1,540	947 bp	+	45.1%
tRNA-Val	Transfer RNA	1,541	1,609	69 bp	+	–
16S rRNA	Ribosomal RNA	1,610	3,169	1,560 bp	+	42.6%
tRNA-Leu (UUR)	Transfer RNA	3,170	3,244	75 bp	+	–
ND1	Protein-coding gene	3,247	4,201	955 bp	+	45.2%
tRNA-Ile	Transfer RNA	4,202	4,270	69 bp	+	–
tRNA-Gln	Transfer RNA	4,268	4,339	72 bp	−	–
tRNA-Met	Transfer RNA	4,341	4,408	68 bp	+	–
ND2	Protein-coding gene	4,409	5,450	1,042 bp	+	42.9%
tRNA-Trp	Transfer RNA	5,451	5,517	67 bp	+	–
tRNA-Ala	Transfer RNA	5,525	5,593	69 bp	−	–
tRNA-Asn	Transfer RNA	5,595	5,667	73 bp	−	–
tRNA-Cys	Transfer RNA	5,700	5,762	63 bp	−	–
tRNA-Tyr	Transfer RNA	5,763	5,833	71 bp	−	–
COX1	Protein-coding gene	5,838	7,406	1,569 bp	+	43.9%
tRNA-Ser (UCN)	Transfer RNA	7,379	7,447	69 bp	−	–
tRNA-Asp	Transfer RNA	7,451	7,518	68 bp	+	–
COX2	Protein-coding gene	7,520	8,203	684 bp	+	43.1%
tRNA-Lys	Transfer RNA	8,269	8,333	65 bp	+	–
ATP8	Protein-coding gene	8,333	8,539	207 bp	+	38.7%
ATP6	Protein-coding gene	8,494	9,174	681 bp	+	44.4%
COX3	Protein-coding gene	9,174	9,957	784 bp	+	44.9%
tRNA-Gly	Transfer RNA	9,958	10,025	68 bp	+	–
ND3	Protein-coding gene	10,026	10,371	346 bp	+	42.5%
tRNA-Arg	Transfer RNA	10,372	10,436	65 bp	+	–
ND4L	Protein-coding gene	10,437	10,733	297 bp	+	43.8%
ND4	Protein-coding gene	10,727	12,104	1,378 bp	+	42.2%
tRNA-His	Transfer RNA	12,105	12,174	70 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	12,176	12,234	59 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	12,235	12,305	71 bp	+	–
ND5	Protein-coding gene	12,306	14,117	1,812 bp	+	42.9%
ND6	Protein-coding gene	14,118	14,645	528 bp	−	43.0%
tRNA-Glu	Transfer RNA	14,646	14,714	69 bp	−	–
CYTB	Protein-coding gene	14,719	15,859	1,141 bp	+	45.7%
tRNA-Thr	Transfer RNA	15,860	15,923	64 bp	+	–
tRNA-Pro	Transfer RNA	15,925	15,992	68 bp	−	–