Macaca nigra
Celebes crested macaque
GC content
42.97%
Whole genome
Non-coding
1,224 bp
D-loop 1,086 bp
Where Celebes crested macaque sits among 2,335 species
Whole-genome GC content against maximum lifespan. Celebes crested macaque has the 347th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,564 bp
- GC skew (G − C) / (G + C)
- −0.404
- AT skew (A − T) / (A + T)
- +0.114
Life history
- Maximum lifespan
- 34 years
- Adult weight
- 8 kg
- Birth weight
- 461 g
- Female sexual maturity
- 4.1 years
- Gestation or incubation
- 176 days
- Litter or clutch size
- 1
- Litters per year
- 0.7
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02743)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,564 bp
Protein-coding11,340 bp
12S rRNA947 bp
16S rRNA1,557 bp
All tRNA1,502 bp
D-loop1,086 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 955 bp | 45.13% | −0.494 | +0.088 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,042 bp | 42.04% | −0.607 | +0.169 | |||||
| COX1Cytochrome c oxidase subunit I | 1,545 bp | 44.27% | −0.269 | −0.052 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 42.25% | −0.349 | +0.094 | |||||
| ATP8ATP synthase F0 subunit 8 | 207 bp | 42.51% | −0.614 | +0.227 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 43.03% | −0.563 | +0.149 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.43% | −0.412 | +0.033 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 40.17% | −0.468 | +0.063 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 41.41% | −0.463 | −0.011 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 41.73% | −0.551 | +0.088 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,806 bp | 42.08% | −0.532 | +0.120 | |||||
| ND6NADH dehydrogenase subunit 6 | 528 bp | 41.29% | −0.642 | +0.381 | |||||
| CYTBCytochrome b | 1,141 bp | 45.57% | −0.485 | +0.076 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 44.14% | −0.134 | +0.195 | |||||
| 16S rRNA16S ribosomal RNA | 1,557 bp | 42.39% | −0.152 | +0.224 | |||||
| D-loopControl region (D-loop) | 1,086 bp | 44.75% | −0.374 | +0.023 |
Codon usage
Counts per codon, darker is more frequent3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.8%
UUU77
UUC142
Leu L16.5%
UUA80
UUG16
CUU76
CUC143
CUA277
CUG36
Ile I8.7%
AUU135
AUC195
Met M6.1%
AUA180
AUG50
Val V3.8%
GUU37
GUC31
GUA54
GUG21
Ser S6.8%
UCU41
UCC78
UCA73
UCG10
AGU12
AGC43
Pro P5.7%
CCU26
CCC117
CCA69
CCG3
Thr T10.1%
ACU68
ACC134
ACA171
ACG12
Ala A6.5%
GCU43
GCC119
GCA78
GCG6
Tyr Y3.4%
UAU48
UAC80
His H2.6%
CAU23
CAC76
Gln Q2.6%
CAA92
CAG7
Asn N4.5%
AAU41
AAC128
Lys K2.4%
AAA87
AAG5
Asp D1.8%
GAU26
GAC42
Glu E2.2%
GAA70
GAG13
Cys C0.8%
UGU8
UGC21
Trp W2.7%
UGA90
UGG13
Arg R1.7%
CGU11
CGC22
CGA27
CGG3
Gly G5.3%
GGU37
GGC78
GGA64
GGG24
Stop 0.2%
UAA6
UAG0
AGA0
AGG1
Genome map
38 annotated features in NC_026120.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 72 | 72 bp | + | – |
| 12S rRNA | Ribosomal RNA | 73 | 1,019 | 947 bp | + | 44.1% |
| tRNA-Val | Transfer RNA | 1,020 | 1,088 | 69 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,089 | 2,645 | 1,557 bp | + | 42.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,648 | 2,722 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,725 | 3,679 | 955 bp | + | 45.1% |
| tRNA-Ile | Transfer RNA | 3,680 | 3,748 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,746 | 3,817 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 3,819 | 3,886 | 68 bp | + | – |
| ND2 | Protein-coding gene | 3,887 | 4,928 | 1,042 bp | + | 42.0% |
| tRNA-Trp | Transfer RNA | 4,929 | 4,995 | 67 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,003 | 5,071 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,073 | 5,145 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,178 | 5,246 | 69 bp | + | – |
| tRNA-Tyr | Transfer RNA | 5,246 | 5,310 | 65 bp | − | – |
| COX1 | Protein-coding gene | 5,315 | 6,859 | 1,545 bp | + | 44.3% |
| tRNA-Ser (UCN) | Transfer RNA | 6,854 | 6,926 | 73 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,928 | 6,995 | 68 bp | + | – |
| COX2 | Protein-coding gene | 6,997 | 7,680 | 684 bp | + | 42.3% |
| tRNA-Lys | Transfer RNA | 7,756 | 7,819 | 64 bp | + | – |
| ATP8 | Protein-coding gene | 7,821 | 8,027 | 207 bp | + | 42.5% |
| ATP6 | Protein-coding gene | 7,982 | 8,662 | 681 bp | + | 43.0% |
| COX3 | Protein-coding gene | 8,662 | 9,445 | 784 bp | + | 46.4% |
| tRNA-Gly | Transfer RNA | 9,446 | 9,513 | 68 bp | + | – |
| ND3 | Protein-coding gene | 9,514 | 9,859 | 346 bp | + | 40.2% |
| tRNA-Arg | Transfer RNA | 9,860 | 9,924 | 65 bp | + | – |
| ND4L | Protein-coding gene | 9,925 | 10,221 | 297 bp | + | 41.4% |
| ND4 | Protein-coding gene | 10,215 | 11,592 | 1,378 bp | + | 41.7% |
| tRNA-His | Transfer RNA | 11,593 | 11,661 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,662 | 11,720 | 59 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,721 | 11,791 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,798 | 13,603 | 1,806 bp | + | 42.1% |
| ND6 | Protein-coding gene | 13,604 | 14,131 | 528 bp | − | 41.3% |
| tRNA-Glu | Transfer RNA | 14,132 | 14,200 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,205 | 15,345 | 1,141 bp | + | 45.6% |
| tRNA-Thr | Transfer RNA | 15,346 | 15,409 | 64 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,411 | 15,478 | 68 bp | − | – |
| D-loop | Control region | 15,479 | 16,564 | 1,086 bp | – | 44.8% |