Macaca silenus
Liontail macaque
GC content
42.86%
Whole genome
Non-coding
1,204 bp
D-loop 1,088 bp
Where Liontail macaque sits among 2,335 species
Whole-genome GC content against maximum lifespan. Liontail macaque has the 256th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,541 bp
- GC skew (G − C) / (G + C)
- −0.410
- AT skew (A − T) / (A + T)
- +0.121
Life history
- Maximum lifespan
- 40 years
- Adult weight
- 7.9 kg
- Birth weight
- 407 g
- Female sexual maturity
- 3.9 years
- Male sexual maturity
- 6.9 years
- Gestation or incubation
- 176 days
- Litter or clutch size
- 1
- Litters per year
- 0.7
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02746)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- high, large sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,541 bp
Protein-coding11,364 bp
12S rRNA945 bp
16S rRNA1,556 bp
All tRNA1,500 bp
D-loop1,088 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 955 bp | 45.13% | −0.517 | +0.107 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,042 bp | 42.04% | −0.630 | +0.202 | |||||
| COX1Cytochrome c oxidase subunit I | 1,569 bp | 45.32% | −0.257 | −0.037 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 43.13% | −0.349 | +0.121 | |||||
| ATP8ATP synthase F0 subunit 8 | 207 bp | 36.72% | −0.632 | +0.206 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 41.85% | −0.572 | +0.141 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 45.79% | −0.393 | +0.016 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 37.86% | −0.511 | +0.079 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 40.40% | −0.450 | −0.028 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 42.67% | −0.565 | +0.104 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,806 bp | 42.30% | −0.518 | +0.106 | |||||
| ND6NADH dehydrogenase subunit 6 | 528 bp | 41.29% | −0.615 | +0.368 | |||||
| CYTBCytochrome b | 1,141 bp | 44.26% | −0.493 | +0.072 | |||||
| 12S rRNA12S ribosomal RNA | 945 bp | 45.19% | −0.152 | +0.220 | |||||
| 16S rRNA16S ribosomal RNA | 1,556 bp | 42.29% | −0.176 | +0.236 | |||||
| D-loopControl region (D-loop) | 1,088 bp | 43.84% | −0.400 | +0.034 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.7%
UUU78
UUC138
Leu L16.6%
UUA79
UUG12
CUU76
CUC137
CUA291
CUG37
Ile I8.5%
AUU128
AUC195
Met M6.0%
AUA190
AUG39
Val V3.8%
GUU35
GUC35
GUA57
GUG18
Ser S7.1%
UCU40
UCC84
UCA75
UCG6
AGU14
AGC50
Pro P5.7%
CCU39
CCC95
CCA76
CCG5
Thr T10.5%
ACU63
ACC153
ACA169
ACG14
Ala A6.2%
GCU49
GCC106
GCA76
GCG6
Tyr Y3.3%
UAU46
UAC80
His H2.7%
CAU21
CAC82
Gln Q2.5%
CAA92
CAG5
Asn N4.4%
AAU48
AAC120
Lys K2.4%
AAA86
AAG7
Asp D1.6%
GAU24
GAC37
Glu E2.2%
GAA69
GAG15
Cys C0.7%
UGU9
UGC19
Trp W2.7%
UGA90
UGG12
Arg R1.7%
CGU9
CGC23
CGA31
CGG1
Gly G5.4%
GGU35
GGC81
GGA56
GGG34
Stop 0.2%
UAA5
UAG1
AGA1
AGG0
Genome map
38 annotated features in NC_025221.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 72 | 72 bp | + | – |
| 12S rRNA | Ribosomal RNA | 73 | 1,017 | 945 bp | + | 45.2% |
| tRNA-Val | Transfer RNA | 1,020 | 1,088 | 69 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,089 | 2,644 | 1,556 bp | + | 42.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,650 | 2,724 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,727 | 3,681 | 955 bp | + | 45.1% |
| tRNA-Ile | Transfer RNA | 3,682 | 3,750 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,748 | 3,819 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 3,821 | 3,888 | 68 bp | + | – |
| ND2 | Protein-coding gene | 3,889 | 4,930 | 1,042 bp | + | 42.0% |
| tRNA-Trp | Transfer RNA | 4,931 | 4,997 | 67 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,005 | 5,073 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,075 | 5,147 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,179 | 5,246 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,246 | 5,311 | 66 bp | − | – |
| COX1 | Protein-coding gene | 5,316 | 6,884 | 1,569 bp | + | 45.3% |
| tRNA-Ser (UCN) | Transfer RNA | 6,857 | 6,925 | 69 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,929 | 6,996 | 68 bp | + | – |
| COX2 | Protein-coding gene | 6,998 | 7,681 | 684 bp | + | 43.1% |
| tRNA-Lys | Transfer RNA | 7,729 | 7,793 | 65 bp | + | – |
| ATP8 | Protein-coding gene | 7,795 | 8,001 | 207 bp | + | 36.7% |
| ATP6 | Protein-coding gene | 7,956 | 8,636 | 681 bp | + | 41.9% |
| COX3 | Protein-coding gene | 8,636 | 9,419 | 784 bp | + | 45.8% |
| tRNA-Gly | Transfer RNA | 9,420 | 9,487 | 68 bp | + | – |
| ND3 | Protein-coding gene | 9,488 | 9,833 | 346 bp | + | 37.9% |
| tRNA-Arg | Transfer RNA | 9,834 | 9,898 | 65 bp | + | – |
| ND4L | Protein-coding gene | 9,899 | 10,195 | 297 bp | + | 40.4% |
| ND4 | Protein-coding gene | 10,189 | 11,566 | 1,378 bp | + | 42.7% |
| tRNA-His | Transfer RNA | 11,567 | 11,635 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,636 | 11,694 | 59 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,695 | 11,765 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,772 | 13,577 | 1,806 bp | + | 42.3% |
| ND6 | Protein-coding gene | 13,578 | 14,105 | 528 bp | − | 41.3% |
| tRNA-Glu | Transfer RNA | 14,106 | 14,174 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,179 | 15,319 | 1,141 bp | + | 44.3% |
| tRNA-Thr | Transfer RNA | 15,320 | 15,384 | 65 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,386 | 15,453 | 68 bp | − | – |
| D-loop | Control region | 15,454 | 16,541 | 1,088 bp | – | 43.8% |