Maccullochella peelii
Murray cod
GC content
42.05%
Whole genome
Non-coding
840 bp
D-loop 768 bp
Where Murray cod sits among 2,335 species
Whole-genome GC content against maximum lifespan. Murray cod has the 163rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,442 bp
- GC skew (G − C) / (G + C)
- −0.321
- AT skew (A − T) / (A + T)
- +0.092
Life history
- Maximum lifespan
- 48 years
- Adult weight
- 62 kg
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04258)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Renamed in build 2
- In the database since
- build 1 (2015-07-01)
- Last changed
- build 2 (2026-11-13)
- Earlier name
- Maccullochella peeli
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,442 bp
Protein-coding11,433 bp
12S rRNA947 bp
16S rRNA1,696 bp
All tRNA1,553 bp
D-loop768 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 996 bp | 44.08% | −0.403 | +0.041 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 43.36% | −0.511 | +0.083 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 42.42% | −0.231 | −0.093 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 39.36% | −0.301 | +0.088 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 35.12% | −0.525 | +0.101 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 40.79% | −0.477 | −0.002 | |||||
| COX3Cytochrome c oxidase subunit III | 786 bp | 43.38% | −0.273 | −0.029 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 44.16% | −0.432 | 0.000 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.16% | −0.452 | −0.020 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,383 bp | 41.43% | −0.438 | +0.089 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,842 bp | 42.02% | −0.463 | +0.088 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 41.38% | −0.509 | +0.510 | |||||
| CYTBCytochrome b | 1,137 bp | 42.39% | −0.423 | +0.005 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 46.99% | −0.124 | +0.223 | |||||
| 16S rRNA16S ribosomal RNA | 1,696 bp | 42.34% | −0.100 | +0.262 | |||||
| D-loopControl region (D-loop) | 768 bp | 29.95% | −0.130 | +0.045 |
Codon usage
Counts per codon, darker is more frequent3,818 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU107
UUC130
Leu L16.6%
UUA135
UUG14
CUU112
CUC116
CUA237
CUG18
Ile I8.3%
AUU149
AUC169
Met M4.9%
AUA155
AUG33
Val V4.8%
GUU50
GUC28
GUA88
GUG18
Ser S6.8%
UCU53
UCC74
UCA70
UCG7
AGU19
AGC35
Pro P5.8%
CCU52
CCC54
CCA109
CCG6
Thr T8.4%
ACU59
ACC135
ACA122
ACG3
Ala A7.8%
GCU60
GCC136
GCA99
GCG3
Tyr Y3.2%
UAU46
UAC75
His H2.6%
CAU27
CAC74
Gln Q2.6%
CAA94
CAG4
Asn N3.4%
AAU36
AAC94
Lys K2.1%
AAA74
AAG5
Asp D1.9%
GAU31
GAC40
Glu E2.6%
GAA89
GAG11
Cys C0.8%
UGU6
UGC23
Trp W3.0%
UGA102
UGG12
Arg R2.0%
CGU8
CGC17
CGA48
CGG3
Gly G6.1%
GGU48
GGC71
GGA89
GGG24
Stop 0.3%
UAA8
UAG2
AGA1
AGG1
Genome map
38 annotated features in NC_023807.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,015 | 947 bp | + | 47.0% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,101 | 2,796 | 1,696 bp | + | 42.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,797 | 2,870 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,871 | 3,866 | 996 bp | + | 44.1% |
| tRNA-Ile | Transfer RNA | 3,847 | 3,914 | 68 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,914 | 3,984 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,984 | 4,053 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,054 | 5,100 | 1,047 bp | + | 43.4% |
| tRNA-Trp | Transfer RNA | 5,100 | 5,170 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,172 | 5,240 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,242 | 5,314 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,352 | 5,416 | 65 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,417 | 5,486 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,488 | 7,038 | 1,551 bp | + | 42.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,039 | 7,109 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,113 | 7,185 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,192 | 7,882 | 691 bp | + | 39.4% |
| tRNA-Lys | Transfer RNA | 7,883 | 7,957 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,959 | 8,126 | 168 bp | + | 35.1% |
| ATP6 | Protein-coding gene | 8,117 | 8,800 | 684 bp | + | 40.8% |
| COX3 | Protein-coding gene | 8,800 | 9,585 | 786 bp | + | 43.4% |
| tRNA-Gly | Transfer RNA | 9,585 | 9,657 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,658 | 10,008 | 351 bp | + | 44.2% |
| tRNA-Arg | Transfer RNA | 10,007 | 10,075 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,076 | 10,372 | 297 bp | + | 49.2% |
| ND4 | Protein-coding gene | 10,366 | 11,748 | 1,383 bp | + | 41.4% |
| tRNA-His | Transfer RNA | 11,747 | 11,815 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,816 | 11,882 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,888 | 11,960 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,961 | 13,802 | 1,842 bp | + | 42.0% |
| ND6 | Protein-coding gene | 13,799 | 14,320 | 522 bp | − | 41.4% |
| tRNA-Glu | Transfer RNA | 14,321 | 14,394 | 74 bp | − | – |
| CYTB | Protein-coding gene | 14,394 | 15,530 | 1,137 bp | + | 42.4% |
| tRNA-Thr | Transfer RNA | 15,535 | 15,606 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,606 | 15,674 | 69 bp | − | – |
| D-loop | Control region | 15,675 | 16,442 | 768 bp | – | 30.0% |