Makaira mazara
Indo-Pacific blue marlin
GC content
46.99%
Whole genome
Non-coding
907 bp
D-loop 852 bp
Where Indo-Pacific blue marlin sits among 2,335 species
Whole-genome GC content against maximum lifespan. Indo-Pacific blue marlin has the 528th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,534 bp
- GC skew (G − C) / (G + C)
- −0.301
- AT skew (A − T) / (A + T)
- +0.032
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,534 bp
Protein-coding11,409 bp
12S rRNA947 bp
16S rRNA1,712 bp
All tRNA1,561 bp
D-loop852 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.72% | −0.419 | −0.064 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 47.95% | −0.470 | −0.002 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 46.81% | −0.209 | −0.110 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.27% | −0.284 | +0.015 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 44.05% | −0.541 | +0.064 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 47.37% | −0.463 | −0.033 | |||||
| COX3Cytochrome c oxidase subunit III | 786 bp | 50.13% | −0.320 | −0.046 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.71% | −0.412 | −0.184 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.86% | −0.363 | −0.171 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 49.24% | −0.400 | −0.024 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 46.06% | −0.421 | +0.018 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 45.79% | −0.439 | +0.435 | |||||
| CYTBCytochrome b | 1,141 bp | 49.34% | −0.364 | −0.093 | |||||
| 12S rRNA12S ribosomal RNA | 947 bp | 48.68% | −0.080 | +0.185 | |||||
| 16S rRNA16S ribosomal RNA | 1,712 bp | 46.55% | −0.122 | +0.213 | |||||
| D-loopControl region (D-loop) | 852 bp | 38.73% | −0.170 | +0.054 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU74
UUC161
Leu L17.5%
UUA83
UUG19
CUU151
CUC195
CUA174
CUG46
Ile I6.9%
AUU132
AUC132
Met M3.9%
AUA59
AUG91
Val V5.9%
GUU65
GUC80
GUA57
GUG22
Ser S6.5%
UCU48
UCC82
UCA58
UCG7
AGU10
AGC44
Pro P5.9%
CCU69
CCC101
CCA49
CCG5
Thr T7.9%
ACU45
ACC134
ACA107
ACG15
Ala A8.9%
GCU76
GCC160
GCA99
GCG5
Tyr Y2.9%
UAU34
UAC76
His H2.9%
CAU26
CAC84
Gln Q2.4%
CAA86
CAG7
Asn N3.1%
AAU30
AAC87
Lys K2.0%
AAA72
AAG3
Asp D2.0%
GAU19
GAC57
Glu E2.6%
GAA76
GAG23
Cys C0.6%
UGU5
UGC18
Trp W3.2%
UGA103
UGG18
Arg R2.0%
CGU9
CGC14
CGA50
CGG5
Gly G6.4%
GGU45
GGC91
GGA71
GGG36
Stop 0.2%
UAA9
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_012680.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,015 | 947 bp | + | 48.7% |
| tRNA-Val | Transfer RNA | 1,016 | 1,087 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,088 | 2,799 | 1,712 bp | + | 46.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,800 | 2,873 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,874 | 3,848 | 975 bp | + | 48.7% |
| tRNA-Ile | Transfer RNA | 3,853 | 3,922 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,922 | 3,992 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,992 | 4,060 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,061 | 5,107 | 1,047 bp | + | 48.0% |
| tRNA-Trp | Transfer RNA | 5,107 | 5,177 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,179 | 5,247 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,249 | 5,321 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,361 | 5,427 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,428 | 5,497 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,499 | 7,049 | 1,551 bp | + | 46.8% |
| tRNA-Ser (UCN) | Transfer RNA | 7,050 | 7,120 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,124 | 7,194 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,202 | 7,892 | 691 bp | + | 43.3% |
| tRNA-Lys | Transfer RNA | 7,893 | 7,965 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,967 | 8,134 | 168 bp | + | 44.1% |
| ATP6 | Protein-coding gene | 8,125 | 8,808 | 684 bp | + | 47.4% |
| COX3 | Protein-coding gene | 8,808 | 9,593 | 786 bp | + | 50.1% |
| tRNA-Gly | Transfer RNA | 9,593 | 9,664 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,665 | 10,013 | 349 bp | + | 48.7% |
| tRNA-Arg | Transfer RNA | 10,014 | 10,082 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,083 | 10,379 | 297 bp | + | 52.9% |
| ND4 | Protein-coding gene | 10,373 | 11,753 | 1,381 bp | + | 49.2% |
| tRNA-His | Transfer RNA | 11,754 | 11,822 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,823 | 11,891 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,896 | 11,968 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,969 | 13,807 | 1,839 bp | + | 46.1% |
| ND6 | Protein-coding gene | 13,804 | 14,325 | 522 bp | − | 45.8% |
| tRNA-Glu | Transfer RNA | 14,326 | 14,395 | 70 bp | − | – |
| CYTB | Protein-coding gene | 14,400 | 15,540 | 1,141 bp | + | 49.3% |
| tRNA-Thr | Transfer RNA | 15,541 | 15,612 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,612 | 15,692 | 81 bp | − | – |
| D-loop | Control region | 15,683 | 16,534 | 852 bp | – | 38.7% |