Mandrillus sphinx
Mandrill
GC content
42.08%
Whole genome
Non-coding
1,201 bp
Including the D-loop
Where Mandrill sits among 2,335 species
Whole-genome GC content against maximum lifespan. Mandrill has the 257th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,546 bp
- GC skew (G − C) / (G + C)
- −0.416
- AT skew (A − T) / (A + T)
- +0.122
Life history
- Maximum lifespan
- 40 years
- Adult weight
- 23 kg
- Birth weight
- 613 g
- Female sexual maturity
- 3.2 years
- Gestation or incubation
- 173 days
- Litter or clutch size
- 1
- Litters per year
- 0.8
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02752)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- high, large sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,546 bp
Protein-coding11,367 bp
12S rRNA946 bp
16S rRNA1,555 bp
All tRNA1,505 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 955 bp | 44.19% | −0.502 | +0.084 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,042 bp | 40.98% | −0.621 | +0.177 | |||||
| COX1Cytochrome c oxidase subunit I | 1,569 bp | 42.83% | −0.298 | −0.012 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 42.40% | −0.359 | +0.117 | |||||
| ATP8ATP synthase F0 subunit 8 | 207 bp | 37.68% | −0.667 | +0.256 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 43.03% | −0.543 | +0.139 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 45.28% | −0.397 | +0.007 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 39.02% | −0.526 | +0.081 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 41.75% | −0.484 | +0.040 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 41.22% | −0.570 | +0.119 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,812 bp | 40.95% | −0.550 | +0.133 | |||||
| ND6NADH dehydrogenase subunit 6 | 525 bp | 39.43% | −0.672 | +0.352 | |||||
| CYTBCytochrome b | 1,141 bp | 43.56% | −0.485 | +0.065 | |||||
| 12S rRNA12S ribosomal RNA | 946 bp | 44.61% | −0.147 | +0.206 | |||||
| 16S rRNA16S ribosomal RNA | 1,555 bp | 40.77% | −0.167 | +0.205 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.4%
UUU81
UUC126
Leu L16.6%
UUA75
UUG13
CUU73
CUC139
CUA302
CUG28
Ile I8.8%
AUU141
AUC194
Met M6.4%
AUA214
AUG30
Val V3.7%
GUU35
GUC34
GUA60
GUG11
Ser S7.0%
UCU41
UCC73
UCA88
UCG8
AGU11
AGC45
Pro P5.4%
CCU33
CCC99
CCA73
CCG2
Thr T10.2%
ACU67
ACC145
ACA163
ACG13
Ala A6.0%
GCU44
GCC111
GCA69
GCG6
Tyr Y3.5%
UAU58
UAC77
His H2.7%
CAU27
CAC75
Gln Q2.7%
CAA92
CAG10
Asn N4.6%
AAU48
AAC127
Lys K2.4%
AAA87
AAG6
Asp D1.6%
GAU23
GAC39
Glu E2.2%
GAA70
GAG14
Cys C0.6%
UGU8
UGC15
Trp W2.7%
UGA93
UGG8
Arg R1.7%
CGU13
CGC17
CGA33
CGG2
Gly G5.5%
GGU35
GGC85
GGA66
GGG23
Stop 0.2%
UAA5
UAG1
AGA0
AGG1
Genome map
37 annotated features in NC_021956.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 72 | 72 bp | + | – |
| 12S rRNA | Ribosomal RNA | 73 | 1,018 | 946 bp | + | 44.6% |
| tRNA-Val | Transfer RNA | 1,022 | 1,090 | 69 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,091 | 2,645 | 1,555 bp | + | 40.8% |
| tRNA-Leu (UUR) | Transfer RNA | 2,655 | 2,729 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,732 | 3,686 | 955 bp | + | 44.2% |
| tRNA-Ile | Transfer RNA | 3,687 | 3,755 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,753 | 3,824 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 3,826 | 3,893 | 68 bp | + | – |
| ND2 | Protein-coding gene | 3,894 | 4,935 | 1,042 bp | + | 41.0% |
| tRNA-Trp | Transfer RNA | 4,936 | 5,001 | 66 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,009 | 5,077 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,079 | 5,151 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,182 | 5,250 | 69 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,250 | 5,315 | 66 bp | − | – |
| COX1 | Protein-coding gene | 5,329 | 6,897 | 1,569 bp | + | 42.8% |
| tRNA-Ser (UCN) | Transfer RNA | 6,870 | 6,938 | 69 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,942 | 7,009 | 68 bp | + | – |
| COX2 | Protein-coding gene | 7,011 | 7,694 | 684 bp | + | 42.4% |
| tRNA-Lys | Transfer RNA | 7,733 | 7,801 | 69 bp | + | – |
| ATP8 | Protein-coding gene | 7,803 | 8,009 | 207 bp | + | 37.7% |
| ATP6 | Protein-coding gene | 7,964 | 8,644 | 681 bp | + | 43.0% |
| COX3 | Protein-coding gene | 8,644 | 9,427 | 784 bp | + | 45.3% |
| tRNA-Gly | Transfer RNA | 9,428 | 9,495 | 68 bp | + | – |
| ND3 | Protein-coding gene | 9,496 | 9,841 | 346 bp | + | 39.0% |
| tRNA-Arg | Transfer RNA | 9,842 | 9,906 | 65 bp | + | – |
| ND4L | Protein-coding gene | 9,907 | 10,203 | 297 bp | + | 41.8% |
| ND4 | Protein-coding gene | 10,197 | 11,574 | 1,378 bp | + | 41.2% |
| tRNA-His | Transfer RNA | 11,575 | 11,643 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,644 | 11,702 | 59 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,703 | 11,773 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,774 | 13,585 | 1,812 bp | + | 41.0% |
| ND6 | Protein-coding gene | 13,589 | 14,113 | 525 bp | − | 39.4% |
| tRNA-Glu | Transfer RNA | 14,114 | 14,182 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,187 | 15,327 | 1,141 bp | + | 43.6% |
| tRNA-Thr | Transfer RNA | 15,328 | 15,393 | 66 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,395 | 15,462 | 68 bp | − | – |