MitoAge

Mico humeralifer

Tassel-eared marmoset

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Maximum lifespan
15 yr
AnAge record
mtDNA size
16,563 bp
RefSeq NC_064174.1
GC content
40.52%
Whole genome
Non-coding
1,214 bp
D-loop 1,142 bp

Where Tassel-eared marmoset sits among 2,335 species

Whole-genome GC content against maximum lifespan. Tassel-eared marmoset has the 1,235th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Tassel-eared marmoset
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,563 bp
GC skew (G − C) / (G + C)
−0.342
AT skew (A − T) / (A + T)
+0.102

Life history

Maximum lifespan
15 years
Adult weight
355.8 g
Birth weight
34.5 g
Female sexual maturity
304 days
Male sexual maturity
334 days
Gestation or incubation
144 days
Litter or clutch size
2

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02693)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,563 bp
Protein-coding11,351 bp
12S rRNA953 bp
16S rRNA1,552 bp
All tRNA1,505 bp
D-loop1,142 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp31.4%26.7%11.1%30.8%41.89%−0.470+0.081
ND2NADH dehydrogenase subunit 21,039 bp37.0%24.7%8.2%30.1%38.31%−0.573+0.198
COX1Cytochrome c oxidase subunit I1,557 bp28.6%29.7%16.2%25.5%41.68%−0.223−0.018
COX2Cytochrome c oxidase subunit II688 bp32.0%27.9%14.1%26.0%40.12%−0.297+0.068
ATP8ATP synthase F0 subunit 8201 bp40.8%24.9%7.5%26.9%34.33%−0.565+0.242
ATP6ATP synthase F0 subunit 6681 bp31.9%28.0%10.1%30.0%40.09%−0.495+0.064
COX3Cytochrome c oxidase subunit III784 bp28.1%26.9%15.1%30.0%45.03%−0.331+0.021
ND3NADH dehydrogenase subunit 3346 bp30.9%26.3%11.3%31.5%42.78%−0.473+0.081
ND4LNADH dehydrogenase subunit 4L297 bp30.3%32.0%11.8%25.9%37.71%−0.375−0.027
ND4NADH dehydrogenase subunit 41,375 bp32.7%28.9%10.2%28.3%38.47%−0.471+0.061
ND5NADH dehydrogenase subunit 51,806 bp32.3%26.8%11.2%29.7%40.92%−0.451+0.093
ND6NADH dehydrogenase subunit 6534 bp39.9%21.7%10.7%27.7%38.39%−0.444+0.295
CYTBCytochrome b1,140 bp29.5%26.5%12.9%31.1%44.04%−0.414+0.053
12S rRNA12S ribosomal RNA953 bp33.6%22.9%19.3%24.2%43.55%−0.113+0.190
16S rRNA16S ribosomal RNA1,552 bp36.5%24.2%16.5%22.9%39.37%−0.162+0.203
D-loopControl region (D-loop)1,142 bp32.2%25.9%14.9%27.0%41.86%−0.289+0.108

Codon usage

Counts per codon, darker is more frequent

3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU88
UUC143
Leu L15.5%
UUA104
UUG15
CUU66
CUC82
CUA282
CUG40
Ile I8.9%
AUU172
AUC165
Met M6.6%
AUA194
AUG58
Val V3.8%
GUU32
GUC27
GUA71
GUG16
Ser S7.6%
UCU33
UCC82
UCA107
UCG10
AGU13
AGC42
Pro P5.5%
CCU37
CCC77
CCA86
CCG8
Thr T9.4%
ACU62
ACC114
ACA170
ACG11
Ala A6.6%
GCU51
GCC101
GCA95
GCG4
Tyr Y3.8%
UAU70
UAC74
His H2.6%
CAU31
CAC69
Gln Q2.4%
CAA81
CAG10
Asn N4.1%
AAU54
AAC100
Lys K2.4%
AAA85
AAG7
Asp D1.8%
GAU17
GAC51
Glu E2.4%
GAA75
GAG16
Cys C0.6%
UGU8
UGC14
Trp W2.7%
UGA91
UGG13
Arg R1.7%
CGU5
CGC14
CGA42
CGG2
Gly G5.4%
GGU42
GGC64
GGA68
GGG31
Stop 0.2%
UAA5
UAG1
AGA0
AGG1

Genome map

38 annotated features in NC_064174.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (40.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,022953 bp+43.6%
tRNA-ValTransfer RNA1,0231,09068 bp+–
16S rRNARibosomal RNA1,0912,6421,552 bp+39.4%
tRNA-Leu (UUR)Transfer RNA2,6442,71875 bp+–
ND1Protein-coding gene2,7213,675955 bp+41.9%
tRNA-IleTransfer RNA3,6763,74570 bp+–
tRNA-GlnTransfer RNA3,7433,81472 bp−–
tRNA-MetTransfer RNA3,8183,88568 bp+–
ND2Protein-coding gene3,8884,9261,039 bp+38.3%
tRNA-TrpTransfer RNA4,9274,99367 bp+–
tRNA-AlaTransfer RNA5,0025,07069 bp−–
tRNA-AsnTransfer RNA5,0725,14473 bp−–
tRNA-CysTransfer RNA5,1785,24467 bp−–
tRNA-TyrTransfer RNA5,2455,30965 bp−–
COX1Protein-coding gene5,3186,8741,557 bp+41.7%
tRNA-Ser (UCN)Transfer RNA6,8636,93068 bp−–
tRNA-AspTransfer RNA6,9347,00269 bp+–
COX2Protein-coding gene7,0037,690688 bp+40.1%
tRNA-LysTransfer RNA7,6917,75767 bp+–
ATP8Protein-coding gene7,7587,958201 bp+34.3%
ATP6Protein-coding gene7,9198,599681 bp+40.1%
COX3Protein-coding gene8,5999,382784 bp+45.0%
tRNA-GlyTransfer RNA9,3839,44967 bp+–
ND3Protein-coding gene9,4509,795346 bp+42.8%
tRNA-ArgTransfer RNA9,7969,86368 bp+–
ND4LProtein-coding gene9,86510,161297 bp+37.7%
ND4Protein-coding gene10,15511,5291,375 bp+38.5%
tRNA-HisTransfer RNA11,53011,59869 bp+–
tRNA-Ser (AGY)Transfer RNA11,59911,65759 bp+–
tRNA-Leu (CUN)Transfer RNA11,65811,72871 bp+–
ND5Protein-coding gene11,73213,5371,806 bp+40.9%
ND6Protein-coding gene13,53414,067534 bp−38.4%
tRNA-GluTransfer RNA14,06814,13669 bp−–
CYTBProtein-coding gene14,14115,2801,140 bp+44.0%
tRNA-ThrTransfer RNA15,28315,35169 bp+–
tRNA-ProTransfer RNA15,35315,42169 bp−–
D-loopControl region15,42216,5631,142 bp–41.9%

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